| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2831 |
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| Symbol | |
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| ID | 6410498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3082416 |
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| End bp | 3083612 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712709 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001991814 |
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| Protein GI | 192291209 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.735299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCCT CCGACTCCAG CGGGACACCC GCGCCGCTCA GCACGCAGAC CCGCCTCGTC
ACCGCGGGGC GCGACACTGC GGCGCAGAAG GGCTTCGTCA ATCCTCCGGT GGTGCACGGT
TCGACGGTGC TGTATCCGAC CGCGGCCGAT CTGCACGCCC ATCGCGGCGA GTACTCCTAT
GGACGGCACG GCACCCCGAC CACCAAGGCG CTGCAGCAGG CGTTGATCGC GCTTGAAGGT
CCGCAGTGTG CCGGCGTCGG CATCACCCCC TCCGGCGTGT CGGCGATCTC GACCGCCCTG
CTCGCCGTGG TCAAAGCCGG CGATCATGTG CTGGTCTGTG ACAACGCCTA TCGCCCGACC
CGGCTGTTCT GCGATCAAAT GCTGAATCGG CTCGGCGTCG AGACCAGTTA TTTCGATCCG
CTGATCGGCG CCGGCATCGC GTCGCATCTT CGGCCGAACA CCGTGGCGGT GGTGGTCGAG
GCGCCGGGAT CGCAGTCGTT CGAGATGCCG GACATCCCGG CGATCGCCGC GGTCGCCAAG
CAGCACGGTG CGCTGGTGAT CGACGACAAC ACCTGGGCGA CGCCGCTGTA TCATCGCTCG
CTGGAACAAG GCGTGGATAT CTCGATCCAG GCCGCGACCA AATATATCGG TGGTCACTCC
GACATCATGT TCGGCACCAT CTCGGCCAAT GCCGCCGCGT GGCCGAAGGT GTCGGAAGCG
ATCCGGCTGC TCGGCGTCTG CGCCGGACCG GACGATGTGT TCCTGGCGCT GCGCGGTCTG
CGCACCCTGG AGGTGCGTCT CGCCCGACAC TATCAGGCGG GCCTGGAGAT GGCGCGCTGG
CTCGCGGCGC GTCCCGAGGT ACAGCGCGTG CTGCATCCCG GGCTCGACAC CGATCCCGGC
CATGCGATCT GGAAGCGCGA CTTCACCGGC GCCTCCGGGC TGTTCTCGAT CGTGCTGCAA
CCGGCGCCGC AGGCTGCCGT CGATGCGCTG CTCGACACCG TGTCGCTGTT TGGGATGGGC
TATTCCTGGG GCGGCTTCGA AAGCCTGGTG ATCCCGTTCG ACTGCGCCTC GTACCGGACC
GCGACGCATT GGAACCCGGG CGGCCCGGCG CTGCGGCTAC ATATCGGGCT CGAAAGCGTC
GATGATCTAA TAGCCGATCT AGAGCAGGGC CTTACAGCTT TTGCTGCCCT TCAATGA
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| Protein sequence | MDASDSSGTP APLSTQTRLV TAGRDTAAQK GFVNPPVVHG STVLYPTAAD LHAHRGEYSY
GRHGTPTTKA LQQALIALEG PQCAGVGITP SGVSAISTAL LAVVKAGDHV LVCDNAYRPT
RLFCDQMLNR LGVETSYFDP LIGAGIASHL RPNTVAVVVE APGSQSFEMP DIPAIAAVAK
QHGALVIDDN TWATPLYHRS LEQGVDISIQ AATKYIGGHS DIMFGTISAN AAAWPKVSEA
IRLLGVCAGP DDVFLALRGL RTLEVRLARH YQAGLEMARW LAARPEVQRV LHPGLDTDPG
HAIWKRDFTG ASGLFSIVLQ PAPQAAVDAL LDTVSLFGMG YSWGGFESLV IPFDCASYRT
ATHWNPGGPA LRLHIGLESV DDLIADLEQG LTAFAALQ
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