| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2825 |
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| Symbol | |
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| ID | 6410492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3076024 |
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| End bp | 3077769 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712704 |
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| Product | glycosyl transferase family 39 |
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| Protein accession | YP_001991809 |
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| Protein GI | 192291204 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAGA CCTCTGCCAG ACCCCGTTTC GGCGCTCCGC GCGAACCTAA AACTACCGTC
GATCCCGGCC GCGGGCTGGT CGCGGTGCTG GATTTCGTGA CGGTCAGTCA TCTGCGCGCC
ACCGCATTTC TGGTTCTGGT CGGTCTGCTG TTTTTCCTGC CGGGGTTCTT CAACATCCCG
CCGATCGATC GCGACGAAGC GCGATTCGCA CAGGCGACCA AGCAGATGGT CGAGACCGGC
GATTTCATCG ACATCCGCTA TCAGGACGAG GTTCGCTACA AGAAGCCGGT CGGCATCTAT
TGGCTGCAGG CCACCGTGGT CGAGACCGCC GGCAAGCTCG GCTTGCCGCG CGCGCAGGTC
CGGATCTGGC TGTACCGGGT GCCGTCGCTG GCCGGCGCGA TCGGCGCGGT GCTGATGACC
TATTGGGCGG CGCTGGCCTT CGTCGGGCGA CGCGGGGCGG TGATCGCCGC GCTGATGCTG
TGCAGCTGTA TCCTGCTCGG TGTCGAGGCG CGGCTTGCCA AGACCGACGC GTTCCTGCTG
TTCACCGTGA CGGCCGCAAT GGGAGCGATG GCGCGTGCCT ATCTCGGCTG GCAGCGCGGC
GACATCGATC CCGACCGGTC ATGGATCGTG CCGGCAGTGT TCTGGACGGC GCTCGCTGGC
GGCATCCTGC TCAAGGGCCC GCTGATCCTG ATGTTCATCG CGCTGACGGT GATCCCGCTT
GCAATCCTCG ACCGCTCGGT GGCGTGGATG TGGCGGCTGC GGCCGCTGCT CGGCCTGCCG
TGGATGCTGC TGTGGGTGCT GCCGTGGTTC ATCGCGATCT ATCTGCGTGC CGGCGACACC
TTCTTTGCGG ACTCGGTCGG CGGCGACATG CTGAGCAAGA TCGCCAGCCC GATGGAGTCG
CACGGCGCGC CTCCCGGTCT TTACTTCCTG CTGTTCTGGG CAACGTTCTG GCCCGGCGCG
CCGCTGGCCG CGATGGCCGC GCCGGCGGTG TGGCGGGCGC GGCGCGAGCC GGGCGCGCAA
TATCTGCTCG CCTGGCTGAT CCCTTCCTGG ATCGTGTTCG AACTGGTGAT CACCAAGCTG
CCGCACTACG TACTGCCGCT GTATCCGGCG ATCGCGATCA TGACCGCTGG CGCGATCGAG
CGCCGGGTGC TGTCGCGCTC CTGGCTGGCG CGCGGCTCGG CGTGGTGGTT CGCGATTCCG
GCGATCATCC TGCCGCTGGT GGTGATCGGC GCGGTGTATC TGACGCGGCA TCCGATCTTC
CTGGCCTGGC CGTTCGCGGC CGGCTCGCTG ATCTTCGGTC TGTTTGCGTG GCGGCTGTTC
GACGACAACC GCGCCGAAGC CTCGCTGCTG AACGGCGCGC TGGCGTCGCT GTTTCTGGTC
GTGGCGGTGT TTGGTGTTGT TGTACCTACG CTGCGTCCGG TGTTTCCGAG CGTCGAGATC
GCCCGCGAGC TGCGCAAGGT GGTCTGCGTC GGGCCCAAGG CGGCCGCCGC CGGCTATCAC
GAGCCGAGCC TGGTGTTCAT GACCGGCACC GACACGTTGC TGACCGACGG CTCCGGCGCC
GCGGACTTCC TGCTGGGCGG CACCTGCCGG TTCGCGATCG TCGAGTCGCG CAGCGAGCGG
GCGTTCGCCA GCCGCGCCGA GGCGATCGGC CTGCGGTATA ATGTTGCGGC CCGGATCGAC
GGCTACAACT TCTCGCAGGG CAAGCCGGTC TCGATCGCGA TCTTCCGCTC CGAGGGCACG
CAGTAA
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| Protein sequence | MIETSARPRF GAPREPKTTV DPGRGLVAVL DFVTVSHLRA TAFLVLVGLL FFLPGFFNIP
PIDRDEARFA QATKQMVETG DFIDIRYQDE VRYKKPVGIY WLQATVVETA GKLGLPRAQV
RIWLYRVPSL AGAIGAVLMT YWAALAFVGR RGAVIAALML CSCILLGVEA RLAKTDAFLL
FTVTAAMGAM ARAYLGWQRG DIDPDRSWIV PAVFWTALAG GILLKGPLIL MFIALTVIPL
AILDRSVAWM WRLRPLLGLP WMLLWVLPWF IAIYLRAGDT FFADSVGGDM LSKIASPMES
HGAPPGLYFL LFWATFWPGA PLAAMAAPAV WRARREPGAQ YLLAWLIPSW IVFELVITKL
PHYVLPLYPA IAIMTAGAIE RRVLSRSWLA RGSAWWFAIP AIILPLVVIG AVYLTRHPIF
LAWPFAAGSL IFGLFAWRLF DDNRAEASLL NGALASLFLV VAVFGVVVPT LRPVFPSVEI
ARELRKVVCV GPKAAAAGYH EPSLVFMTGT DTLLTDGSGA ADFLLGGTCR FAIVESRSER
AFASRAEAIG LRYNVAARID GYNFSQGKPV SIAIFRSEGT Q
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