Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2823 |
Symbol | |
ID | 6410490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3068568 |
End bp | 3073781 |
Gene Length | 5214 bp |
Protein Length | 1737 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642712702 |
Product | alpha-2-macroglobulin domain protein |
Protein accession | YP_001991807 |
Protein GI | 192291202 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGTC TGGTTCGCGC CCTCACGCTT TGCGCCGGAT TGGCGCTCGG GCTCGCATCG GCTCAGGCGG CCGACAAGGC GTTCCAGCGC GACGAGCTGG CGGACGCCGC GATCAAGCTC GAAGCCCAGA TCAAGAGCGA GGCGGCGGCC ACCAATAAGC CGACCGCGGT GCTGCGCAGC GACGCCGACG CCGCGTTCAA GCGCGGCGAC TACCGCGGCG GGCTGCAGAT TCTGGGGCAG ATCGCGGCGC TCGATCCGGC CGACGGCGAC AACTGGTTGC GGCTGGCCCG CACCGTGCTG CAGATCAAGG CCGCCACCAG TTCCGAACAG ACCTTCCTGC GCGAGCGCGC CACCACCGCG GCCTATATCG CCTACCAGCG CGCCAAGAGC CCGCGCGAGG AGGCCGACGC GCTGGCGCTG CTCGGCCGGG CGATGGCCGA CCGCAGCCTG TGGCGGCCGG CGCTGGATTC CCTGCGGCTG TCGCTGGATC TGCGTGAGGT CGCCGACATC CGCGGCCAAT ATGAGAAGCT GCGCGCGGAG CATGGCTTCC GGCTGCTCGA TTACACGGTG GACTCGGATT CGGCGTCGCC GCGGGTGTGC TTCCAGTTCT CCGAGGAACT CGCCAAGCGC ACCGACTTCG CGCCCTATGT GACGCTGGCC GGCACCGACA AGCCGGCGAT CAGCGCCGAG GAGCGCCAGC TCTGTGTCGA GGGGGTGAAG CACGGCGAGC GCTACAACAT CAATCTGCGC GCCGGCCTGC CGTCGACCGT GAAAGAGGCG CTGGCGAAGT CGGCCGAGTT CAACGTCTAT GTCCGCGACC GCAAGCCGCT GGTGCGCTTC ACCGGCAGAG CCTATGTGCT GCCGCGCACC GGCCAGCGCG GTATTCCGCT GGTCAGCGTC AACACCCCGA CCGTGGCGGT GCAGGTGTTC CGGATCGGCG ACCGCAACCT GATCAACACC GTGGTCGACA GCGACTTCCA GCGGACGCTG AGCCGCTACC AGCTCAGCGA TCTCGGCAAC GAGCGCGGCG CCAAGGTGTG GACGGGTGAG CTCGACACCG CGACCGCGGC GCTGAATGCC GACGTCACCA CCGCGTTCCC GGTCGACCAG GTGCTCGGCG ACCTGCAGCC CGGCGTCTAT GTGATGACCG CCGCGCCCAA GGGCCCGACC GCCAATTCCG ACGATGACGG CCAGCTCGCC ACCCAGTGGT TCATCGTTTC CGATCTCGGC CTGACCGCGT TCTCCGGCAA CGACGGCGTC CACGTCTTCG TCAATTCGCT GGCCTCGACC GATCCGCTCG CCAATACCGA GGTGCGGCTG ATCGCGCGCA ACAACGAGGT GCTGGCGACG CGCAAGACCG ACGCTTCCGG CCACGTGCTG TTCGAAGCCG GTCTGGCGCG CGGCGAGGGC GGGCTGTCGC CGGCGCTGCT GACCGCGTCC AGCGACAAGG CCGACTATGC CTTCCTCAGC CTGAAGACCA ACGCCTTCGA CCTGTCGGAC CGCGGCGTCT CCGGGCGTGC GGTGCCGGCC GGCGCCGACG CCTTCGTCTA TGCCGAGCGC GGCGTGTATC GCTCCGGCGA GACCGTCCAC CTCACCGCGC TGCTGCGCGA CGGGCAGGGC GTGGCGATGA CCGCCAGTCC GATGACGCTG GTGGTGGAGC GGCCGGACGG CGTCGAATAC CGCCGCGCTG TGCTGTCCGA TCAGGGCGCC GGTGGCCGCA GCCTCGATGT CGCGCTCAAT TCGGCGGTGC CGACCGGTAC CTGGCGGGTC CGCGCGTTCA CTGATCCGAA GGGCGCCAGT GTCGGCGAAA CCACCTTCAT GGTCGAAGAC TATGTTCCCG ATCGGATCGA ATTCGACATT TCCACCAAGG ACAAGGCGAT CAAAGCTGAT GCTCCTGTGG AACTTAAGGT CGATGGCCGT TTCCTGTATG GCGCGCCGGC CTCGGCGCTC CAGATCGAAG GCGATCTGCT GGTGGCGCCG GCCGAAGGGC GGCCCGGCTA TGCCGGCTAT CAGTTCGGCG TCGCCGACGA AGAGACCACC AGCAACGAGC GCACGCCGCT CGAAAACCTG CCCGAGACTG ACGCCGACGG CGCCGCCACC TTCGAATTGA GCCTGCCGAA GCCGCCGTCG TCGACCCGGC CGCAGGAGGC GCAGATCTTC GTGCGGATGG CGGAGGCCGG CGGCCGCGCG GTCGAGCGCA AGCTGGTTCT GCCGATCGCG CCGGCGGCGG CGATGATCGG CGTCAAGCCG CTGTTCGCCG ACCGCAACGT CGCCGAAGGC GATGTCGCCA AATTCGATGT CGCCTTTGTG GCGCCGGACG GCACCTCGCT GCCGCGCAGC GGCCTGCGTT ACGAGCTGCT CAAGATCGAG TCGCGTTATC AGTGGTACCG GCAGAATTCG TCCTGGGATT ACGAGCCGGT GAAGTCGACC AAGCGGGTTG CCGACGGCGA CCTGTCGATC AAGGCCGGCG AGCCGGCGCG GCTGCAGTTC AACCCGGAGC CCGGCCGCTA CCGGCTCGAC GTCAAGACCG CCGATGTTGC CGGACCGCTG ACCTCGGTGC AGTTCGACGT CGGCTGGTAT TCGGACGGTT CGGCCGATAC GCCTGATCTG CTGGAGACCT CGATCGACAA GCCGGAATAC GCCTCCGGCG ACACCATGAC GGTGACGGTC AACGCGCGCA CCGCGGGTCT TCTGACCGTC AACGTGCTCG GTGACCGGTT GCTGACCACG CAGTCGCTGC AGGTCAAGCC GGGCAGCTCG CAGGTCAAGC TCAGCGTCGG CAAGGATTGG GGCTCGGGCG CTTATGTCGT CACGACGCTG CGGCGGCCGC TCGACACCTC CGCGCAGCGG ATGCCGGGCC GGGCGATCGG GCTGAAATGG TTCGGCATCG ACAAGGCGGC GCGGACGCTG TCGGTCGAGC TGTCGCCGCC GGCCTTGGTG CGGCCGTCGA CGACACTGAA GCTGCCGGTC AAGCTCGGCG GGCTGTCGCC CGGTGAAGAC GCCAAGATCG TGGTTGCCGC GGTCGACGTC GGCATCCTCA ATCTCACCGG CTACAAGCCG CCGGCGCCGG ACGTGTATTA TCTCGGCCAG CGCCGGCTGA GCGCGGAGAT CCGCGACCTC TATGGCCAGT TGATCGACGG CATGCAGGGT GCGCGCGGCC AGATCCGCTC CGGCGGCGAC TCCTCGGCCG CGGAGCTGCA GGGCAGCCCG CCGACGCAGA AGCCCTTGGC GCTGTATTCC GGCATCGTCA CCGTGGCGGC CGACGGCACC GCGACGATCG ACCTCGAGAT CCCCGAATTC GCCGGCACGG CGCGGGTGAT GGCGGTGGCG TGGACGGCCA CCAAGGTGGG CCGCGCCAAC ACCGACGTCA CGGTGCGCGA TCCGGTGGTG CTGACCACGA CGCTGCCGCG CTTCCTGCGC AACGGCGACC GCGGCACCAT GGCGTTCGAT CTCGACAACG TCGAAGGCGC CGCGGGCGAC TACACCATCA AGGTCAGCGC CAGCGGTCCG GTGAAGCTGA GCGGCGAGGC GGCCACGACG ATGAAGCTCG CCGCCAAGCA GCGCGGCTCG GCCAAGCTGA TGCTGGACGC CGGCGGCGCC GGCACGGCTG CGCTCGACGT GGCGATCCAG GGGCCGAACG GCCTGTCGCT GGCGCGGCAC TATGCGCTCG ACATCCGTCC CGCCAACCAG ACCCTGGCGC GGCGCTCGAT CCGGACGCTC GCCAAGGGTG AAAGCCTGAC GCTGACCTCG GACATGTTTT CGGACCTGGT GCCGGGCACC GGCGGGCTGT CGCTGTCTGT GAGCATGTCG ACCGCGCTCG ACGCCGCGAC CATCCTCAAG GCGCTCGACC GTTATCCGTT CGGTTGCACC GAGCAGATCA CCAGCCGCGC GATGCCGCTG CTCTACGTCA ACGATCTCGC CGCCGGCGCG CATCTGGCGA TGGACGGCAG CGCCGACGAG CGGATCAAGG GCGCGATTGA CCGGCTGCTG TCGCGGCAGG GCTCGAACGG CTCGTTCGGG CTGTGGTCGA CGGGGGGCGA CGATGCCTGG CTCGACGCCT ACGTGACCGA CTTCCTGACC CGGGCGCGCG AGAAGCGTTT CGTGGTGCCG GACGTCGCCT TCCGCGCCGC GCTCGACCGG ATCCGCAACT CGGTGGTCAA TGCCGACGAG CCGGAAAAGG ACGGCGGCCG CGATTTGGCC TACGGGCTGT ACGTGCTCGC CCGCAACGGC GCCGCGCCGA TCGGCGACCT GCGCTATCTC GCCGACACCA AGCTCGACAA GCTGGCGACC CCGATCGCCA AGTCGCAGCT CGCCGCGGCG CTGGCGCTGG TCGGTGATCG CGCGCGGGCC GAGCGGGTCT ATGCGGCGGC GGCCGACAGT CTCAATCCCA AGCCTTCGAT CGTGTTCGGC CGGGTCGACT ACGGCTCCGA GCTGCGCGAC GCCGCCGCTT TGGTGTCGCT CGCCAGCGAA GGCAACGCGC CGCGACCGAC GCTGACGACG GCGGTGCAGC GGGTCGAAGC CGCGCGCGGG TTGTCGCCTT ACACCTCGAC CCAGGAGAAC GCCTGGCTGG TGCTGGCGGC GCGCGCGCTC GCCAAGGAGA CGATGGCGCT CGACCTCAAC GGCGATGCGG TGAAGACGGC GCTGTATCGC AGCTACAAGG CCGACGAGGT GAAGGCCAAG CCGCTCAAGA TCGCCAACAC CGGCGACTCC CCGGTGCAGG CGGTGGTGAC GGTGAGCGGT TCGCCGATCA CGCCCGAGCC GGCCGCGAGC AACGGCTTCA AGATCGAGCG TCATTACTTC ACGCTCGGCG GCGAGCCGGC CGACATCACC AAGGCGAAGC AGAACGAGCG CTTCGCGGTG GTGCTGACGA TCACCGAACC GAAGCCGGAA TACGGCCACG TCATGATCGC CGACTACCTG CCGGCGGGCA TCGAGATCGA CAACCCGCAT CTGGTGTCGT CGGGCGATTC CGGCACGCTG AGCTGGATCG CCGACGGTGC CGAGCCGGTG AACACCGAGT TCCGCGATGA CCGCTTCACC GCCGCGATCG ACCGCAAGGC CGACGACAAG TCGGTGTTCA CGGTCGCCTA CGTGGTGCGC GCTGTGTCGC CCGGCAAATA CGTGCTGCCG CAGGCGGTGG TCGAGGACAT GTACAATCCC TCGCGCTATG GCCGCACCGG CACCGGTACG ATCGAGGTGC GGTCGGCGAA ATGA
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Protein sequence | MIGLVRALTL CAGLALGLAS AQAADKAFQR DELADAAIKL EAQIKSEAAA TNKPTAVLRS DADAAFKRGD YRGGLQILGQ IAALDPADGD NWLRLARTVL QIKAATSSEQ TFLRERATTA AYIAYQRAKS PREEADALAL LGRAMADRSL WRPALDSLRL SLDLREVADI RGQYEKLRAE HGFRLLDYTV DSDSASPRVC FQFSEELAKR TDFAPYVTLA GTDKPAISAE ERQLCVEGVK HGERYNINLR AGLPSTVKEA LAKSAEFNVY VRDRKPLVRF TGRAYVLPRT GQRGIPLVSV NTPTVAVQVF RIGDRNLINT VVDSDFQRTL SRYQLSDLGN ERGAKVWTGE LDTATAALNA DVTTAFPVDQ VLGDLQPGVY VMTAAPKGPT ANSDDDGQLA TQWFIVSDLG LTAFSGNDGV HVFVNSLAST DPLANTEVRL IARNNEVLAT RKTDASGHVL FEAGLARGEG GLSPALLTAS SDKADYAFLS LKTNAFDLSD RGVSGRAVPA GADAFVYAER GVYRSGETVH LTALLRDGQG VAMTASPMTL VVERPDGVEY RRAVLSDQGA GGRSLDVALN SAVPTGTWRV RAFTDPKGAS VGETTFMVED YVPDRIEFDI STKDKAIKAD APVELKVDGR FLYGAPASAL QIEGDLLVAP AEGRPGYAGY QFGVADEETT SNERTPLENL PETDADGAAT FELSLPKPPS STRPQEAQIF VRMAEAGGRA VERKLVLPIA PAAAMIGVKP LFADRNVAEG DVAKFDVAFV APDGTSLPRS GLRYELLKIE SRYQWYRQNS SWDYEPVKST KRVADGDLSI KAGEPARLQF NPEPGRYRLD VKTADVAGPL TSVQFDVGWY SDGSADTPDL LETSIDKPEY ASGDTMTVTV NARTAGLLTV NVLGDRLLTT QSLQVKPGSS QVKLSVGKDW GSGAYVVTTL RRPLDTSAQR MPGRAIGLKW FGIDKAARTL SVELSPPALV RPSTTLKLPV KLGGLSPGED AKIVVAAVDV GILNLTGYKP PAPDVYYLGQ RRLSAEIRDL YGQLIDGMQG ARGQIRSGGD SSAAELQGSP PTQKPLALYS GIVTVAADGT ATIDLEIPEF AGTARVMAVA WTATKVGRAN TDVTVRDPVV LTTTLPRFLR NGDRGTMAFD LDNVEGAAGD YTIKVSASGP VKLSGEAATT MKLAAKQRGS AKLMLDAGGA GTAALDVAIQ GPNGLSLARH YALDIRPANQ TLARRSIRTL AKGESLTLTS DMFSDLVPGT GGLSLSVSMS TALDAATILK ALDRYPFGCT EQITSRAMPL LYVNDLAAGA HLAMDGSADE RIKGAIDRLL SRQGSNGSFG LWSTGGDDAW LDAYVTDFLT RAREKRFVVP DVAFRAALDR IRNSVVNADE PEKDGGRDLA YGLYVLARNG AAPIGDLRYL ADTKLDKLAT PIAKSQLAAA LALVGDRARA ERVYAAAADS LNPKPSIVFG RVDYGSELRD AAALVSLASE GNAPRPTLTT AVQRVEAARG LSPYTSTQEN AWLVLAARAL AKETMALDLN GDAVKTALYR SYKADEVKAK PLKIANTGDS PVQAVVTVSG SPITPEPAAS NGFKIERHYF TLGGEPADIT KAKQNERFAV VLTITEPKPE YGHVMIADYL PAGIEIDNPH LVSSGDSGTL SWIADGAEPV NTEFRDDRFT AAIDRKADDK SVFTVAYVVR AVSPGKYVLP QAVVEDMYNP SRYGRTGTGT IEVRSAK
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