Gene Rpal_2819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2819 
Symbol 
ID6410485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3065065 
End bp3065544 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content71% 
IMG OID642712697 
Producthypothetical protein 
Protein accessionYP_001991803 
Protein GI192291198 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.162218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGA CCTGGATCGC GATGCTGCCT TATCTGGCGC ATCAGGCGGC GTTCGGTGCG 
CTGGCCGCGG CCGGCTTCGG CGTGCTGTTC AATTTCGGCT GGCGCACGCT CGCCTGGTGC
GCGGTCGCCG GCGCGCTGGC GCTGGCGGTG CGCACCGTGG TGCAGCAGAC CGGCGGCAGC
CTGGAGGCCG CGACCTTCGC GGCGGCGTTC GTCACCTCGT TCACCGCGAT CCTGGCGCTG
CGCTGGCTCG GCCCCGCCTG CAACGCGGTG GCGCTGGCCG GCTGCATTCC GATGGTGCCG
GGCGCGTTCT TCGGCCAGGC GATGCTCGGC TATATGGCGG TCGCCGCCGA CACCACCGGC
TCCTCGACCG CGCAGATCGT CGCGGCCTCG CAGGCGTTCG TGCGCGTGCT GTCGATCGTC
GGCGCGATCG GCGCGGGTCT GGCGATCCCG GCCTATCTCT TAAAGAGCCG GCAGTTTTGA
 
Protein sequence
MSATWIAMLP YLAHQAAFGA LAAAGFGVLF NFGWRTLAWC AVAGALALAV RTVVQQTGGS 
LEAATFAAAF VTSFTAILAL RWLGPACNAV ALAGCIPMVP GAFFGQAMLG YMAVAADTTG
SSTAQIVAAS QAFVRVLSIV GAIGAGLAIP AYLLKSRQF