| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2813 |
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| Symbol | |
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| ID | 6410479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3057969 |
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| End bp | 3058988 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712691 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001991797 |
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| Protein GI | 192291192 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.544933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCAC GCCGCCACCT CCTCGTCTCC GCACTGGCAG CGCCCGCGGT CCTGAAATAC
GGGATCGGCT CAGCGCAGGC GGCAACGACG CTGAAGATCT CGCATCAGTT TCCCGGCGGC
ACCATCGACA AAGGCGACTT CCGCGACCGG CTGTGCCGCA AGTTCGCCGA CGAAATCAGC
AAGCGCTCCG GCGGCGAACT GGTCGGCGAA GTCTATCCGG GCTCATCGCT GATCAAGACC
AACGCGCAGT TCTCGGCGAT GCGCAAAGGC GCGCTCGATC TGTCGCTGTA TCCGATGCCC
TATGCGGGCG GCGAAGTCCC GGAGACCAAT ATCGGCCTGA TGCCGGGACT GGTCTCGACC
TATGAGCAGG GCCTGTCGTG GAAGACCAAG CCGGTCGGCA AGGCGCTGAC CGACTTCCTC
GCCGACAAGG GCATCGTGCT GGTCACCTGG GTGTGGCAGG CCGGCGGCGT CGCCAGCCGT
TCCAAGGCGC TGCTGTCACC TGACGACGCC AAGGGCCTCA AGGTCCGCGG CGGCTCGCGC
GAGATGGACA TGGTGCTGCA GCAGGCCGGC GCCGCGGTGC TGTCGGTACC GTCCAACGAG
ATCTATGCCG CGATGCAGAC CGGCGCCTGC GACGCCGGCA TCACCTCCTC CACCAGCCTG
ATCTCGTTCC GGCTCGAGGA AGTCGCCAAG CACCTCACCT CCGGCGCGGA CGCCTCGTAC
TGGTTCATGC TCGAGCCGCT GATGATGTCG AAGGCGATCT TCGACAAGCT GCCGAAGAAC
CATCAGGACA TCATTCTGTC GGTCGGTGCC GAGCTCGAAA CGTTCGGCAA GCAAGGCGCC
CAGGCCGACG ATATCGAGGT CGCCAAGGTG TACGAGAAGG CCGGCGCCAA GGTCGACAAG
CTCGACGCCG CCACGGTCGA GAAGTGGGCC GTGATCGCCC GCGACACCGC GTGGAAGGAC
TACGGCAAGA AGACCGCGAC CTGCGCCAAC CTGCTCAAGC TCGCGACCGA CGCGGCATGA
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| Protein sequence | MLSRRHLLVS ALAAPAVLKY GIGSAQAATT LKISHQFPGG TIDKGDFRDR LCRKFADEIS
KRSGGELVGE VYPGSSLIKT NAQFSAMRKG ALDLSLYPMP YAGGEVPETN IGLMPGLVST
YEQGLSWKTK PVGKALTDFL ADKGIVLVTW VWQAGGVASR SKALLSPDDA KGLKVRGGSR
EMDMVLQQAG AAVLSVPSNE IYAAMQTGAC DAGITSSTSL ISFRLEEVAK HLTSGADASY
WFMLEPLMMS KAIFDKLPKN HQDIILSVGA ELETFGKQGA QADDIEVAKV YEKAGAKVDK
LDAATVEKWA VIARDTAWKD YGKKTATCAN LLKLATDAA
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