| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2811 |
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| Symbol | |
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| ID | 6410477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3056066 |
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| End bp | 3057424 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712689 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001991795 |
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| Protein GI | 192291190 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGTCC TCGGCATTGG GATCAGTTAC GGCCTCGCCA CGCTGGCGGC GATGTTCTCC
GGCATGCCGA TCGCATTTGC GCTCGGCGCC GTCGCGCTGG TGTTCATGGC GATCTACATG
CCGCACGCCT CGCTCGATAC CGTGACGCAG AACGTCTACG AGGAGATGGC GTCGATCACG
CTGCTGTCGA TCCCGCTGTT CATCCTCAAG GGTGCCGCGA TCGGCAAGTC CCGTGCCGGC
CAGGACCTGT ACTCCGCCCT GCACGCCTGG CTGCATCGCG TGCCGGGCGG GCTCGGCGTC
GCCAACGTGT TCGCCTGCGC GCTGTTCGCC GCGATGGCCG GCTCGTCGCC GGCAACGTGT
TCGGCGATCG GCTCGGCCGG CATCCCGGAG ATGCGCAAGC GCGGCTATTC CGGCGGCTTC
GCAGCCGGGA TTATCGCGGC CGGCGGCACG CTCGGCATCC TGCTGCCGCC CTCGATCACC
ATGATCCTGT TCGCGGTCGC CGCCGAAAAA TCGCTCGGCC GGCTGTTCCT CGCCGGCATC
GGGCCGGGAT TGCTGCTGGT GACGCTGTTC GGCATCTACG CGGTGATCCG CTTCCGCAAG
GAATACGCCA CCGCAAAGGC GGCGTACGAA GCGACCGGCC AGACGTCCGC AATCCTGACC
GACGAGAAAT TCACCATGGC GCAGCGCTTC GGCGCGCTGC CGCGGGTGCT GCCGTTCGTC
ATCTTGCTCA CCGGCGTGAT GATCGCGCTG TATGGCGGCT ACGCGACGCC GTCCGAAACC
GCCGGCCTCG GCGGCCTGCT GGCGCTGCTG CTGATCGCGC TGATCTACGG GGTGTGGAAG
CCATCCGACC TGTCGCCGAT CATGACCTCG ACGGTCCGCG AGTCGACCAT GCTGATGATG
ATCATCGGCA TGTCGCTGCT GTACTCCTAC GTGATGAGCT ATCTGCACAT CTCGCAGTCG
GCCGCCGAAG CGATCGTGGC AATGCAGCTG CCGCGCTGGG GCCTGCTCGC CGCGATCCTG
GCGCTGGTGG TGGTGCTCGG CTTTTTCCTG CCGCCGGTGT CGATCATCCT GATGACCGCG
CCGATCATCC TGCCGCCGCT GCGCGCGGCC GGCTTCGACA TTATCTGGTT CGGCGTGGTG
ATGACCATCG TGATGGAGAT GGGCCTGATC CACCCGCCGG TCGGCCTCAA CATCTTCGTC
ATCCGCAACG TCGCCCCCGA TATCCCGCTC TCCGAGGTGA TCTGGGGCAC GCTGCCGTTC
GTACTGCTGA TGATGTTCGC AGTGCTGCTG CTGTGCCTGG TCCCCGGCAT CTCGACCTGG
CTGCCGGATC TGGTGATGGG GCCGGAGAGC GTCAGATAG
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| Protein sequence | MTVLGIGISY GLATLAAMFS GMPIAFALGA VALVFMAIYM PHASLDTVTQ NVYEEMASIT
LLSIPLFILK GAAIGKSRAG QDLYSALHAW LHRVPGGLGV ANVFACALFA AMAGSSPATC
SAIGSAGIPE MRKRGYSGGF AAGIIAAGGT LGILLPPSIT MILFAVAAEK SLGRLFLAGI
GPGLLLVTLF GIYAVIRFRK EYATAKAAYE ATGQTSAILT DEKFTMAQRF GALPRVLPFV
ILLTGVMIAL YGGYATPSET AGLGGLLALL LIALIYGVWK PSDLSPIMTS TVRESTMLMM
IIGMSLLYSY VMSYLHISQS AAEAIVAMQL PRWGLLAAIL ALVVVLGFFL PPVSIILMTA
PIILPPLRAA GFDIIWFGVV MTIVMEMGLI HPPVGLNIFV IRNVAPDIPL SEVIWGTLPF
VLLMMFAVLL LCLVPGISTW LPDLVMGPES VR
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