| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2805 |
|---|
| Symbol | |
|---|
| ID | 6410471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3048236 |
|---|
| End bp | 3049354 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642712683 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001991789 |
|---|
| Protein GI | 192291184 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG CGCTGGCGAT CGTGTCGCTG TTCCCGAGCG GCGGGCTGCA GCGGGACTGC
ATGGGCATCG CCCGGCGGCT GATGGCGCGC GGCCATGACG TCACCATCCT GGCTTCACGG
CGGCAGGGCG AGCTGCCGAC CGACCTGAAG ATTGAGCTGC TGCCGGTCAG CGCCTGGAGC
AATCACGGCC GCGACCAGCG CTTTGCCGAA GCGGCGGCGC AGCGCAAACC GGCGTTCGAC
CGGCTCGCCG GCTTCGGCAA GCTGACCGAT CTCGACGTGC TGTACTGCGC CGATGGCTGT
GACAAGGCGC GTCCGGCGCG ATGGTCCGAT CGCTTCACCG CGCGTCGCCG GATCAAGCTT
GGGCTGGAGG CCGCGAGTTT CGCGCCTGGG CGGTCGACGC AGTGCCTGCT GCTCAGCCAG
AACCAGCTCG ACAGCTTCCA GCAGGCCTGG GGCAGCGAAT CGGAGCGGCT GGCGCTGATG
CCGCCGACGA TCGATCCCAG CCGGCGGCAT CCCGAGTTTC GCGCCGACGG CAGCCGTGAG
CGGATCCGCG GCGAGCTTGG CGTCGTCGGC GATACCGTCG TCTGGCTGGC TGTGGCGGCG
CATCCTCTGA CCAAGGGGCT CGACCGCGCG GTGGCGGCGC TTGCGGCGTT CCCGGAGGCG
CGGCTGGTGG TGGCCGGCGT GGCCGACGAC AGCAAGCAGG GGCGGCTGAT GCGCCGGCTC
GCGGCCGACG CCAAGGTCTC GGACCGCATC ACGCTGCTCG GCATGCGCCG CGACATTCCC
GAATTGATGG CGGGGGCCGA TGTGCTGATC CATCCGGCCC GGGTCGACAC CACCGGTACC
GCGATCCTGG AGGCGGTGGT CAACGGCCTG CCGGTGATCA CCACCGCGGT GTGCGGCTAT
GCGCGCCACG TCGCGGCAGC CGACGCCGGC GTGGTGCTGC CGGAGCCGTT TGGCCCCGGC
AACCTGAGCG AGGCATTGCG TCAGGCGTCG GCACCAGGGC GCCGTGCGTC ATGGAGCGAG
AACGGCGCCC GCTATGGCGC CAGCCACGAT CTCTATTCCG GGCTCGACTG CGCCGCCGCG
ATCATCGCCG GCGAGACTGC TGGCACGCCG CTGTCCTGA
|
|---|
| Protein sequence | MKIALAIVSL FPSGGLQRDC MGIARRLMAR GHDVTILASR RQGELPTDLK IELLPVSAWS
NHGRDQRFAE AAAQRKPAFD RLAGFGKLTD LDVLYCADGC DKARPARWSD RFTARRRIKL
GLEAASFAPG RSTQCLLLSQ NQLDSFQQAW GSESERLALM PPTIDPSRRH PEFRADGSRE
RIRGELGVVG DTVVWLAVAA HPLTKGLDRA VAALAAFPEA RLVVAGVADD SKQGRLMRRL
AADAKVSDRI TLLGMRRDIP ELMAGADVLI HPARVDTTGT AILEAVVNGL PVITTAVCGY
ARHVAAADAG VVLPEPFGPG NLSEALRQAS APGRRASWSE NGARYGASHD LYSGLDCAAA
IIAGETAGTP LS
|
|---|
| |