| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2793 |
|---|
| Symbol | |
|---|
| ID | 6410457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3037113 |
|---|
| End bp | 3038168 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642712669 |
|---|
| Product | tRNA synthetase class II (D K and N) |
|---|
| Protein accession | YP_001991777 |
|---|
| Protein GI | 192291172 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0477928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCGA CAAGCCAACC GTCGCCCTGG TGGAACAGGG ATAGGTATCT GGACCGTCAG
CCGTTTTTGC GCGCGCGGGG GGGCGTGACC AGGGCCGTGC GGGCCTGGTT CGAGGCGGCG
GGATTTACCG AGGTCGAGAC CGCGATCCTG CAGATCTCCC CCGGCAACGA GACCCATCTG
CACGCCCCGC GCACCGAACT CTTGGGACCG GATGGCGAGC GGCGCATCCG ATACCTGCGG
ACCTCGCCGG AGTTCGCCTG CAAGAAGCTG CTGGCGGCCG GCGAGACGCG AATCTTCGAG
CTTGCCCGGG TGTTTCGCGA CCGCGAGCGC GGCCGGGTGC ATCTGCCGGA GTTCACCATG
CTGGAGTGGT ATCGCGCCGA GGCGCCGTAC CAGCAGGTGA TCGACGACTG CATCGCGCTG
GTCCGCGTGG CGGCCGAGGC GACCGGTATC GCGACGTTTT CGTTCAGGGG GCGGCGCGCC
GATCCGCAGG CCGAGCCGGA GCGATTGACG GTGGCCGATG CGTTCGCCCG CTTTGCTGGC
ATCGATCTCC TTGCCACGAT TGCCAAAGGT GAGGGGGATC GCACGGCGCT GGCCAACGCA
GCCGCTGCAC GGGTGCGGAT CGCCGAGGAC GACACCTGGT CCGATATCTT CAGCAAGGTG
CTGGTCGAGC ATGTCGAGCC GCGGCTCGGC GATGGACGGC TGACGGTGCT CAGTGAGTAT
CCGGCGCCGG AAGCGGCGTT GGCCCGGACC AAACCCGACG ATCCGCGGGT CGCCGAACGG
TTCGAGCTGT ATGCCTGCGG CGTCGAACTC GCCAATGGCT TCGGCGAACT CACCAACGCC
GCAGAGCAGC GTGAGCGCTT CATGGCCGCG ATGGACGAGA AGGAGCGGCG CTACGGTGAG
CGCTATCCGC TCGACGAGGC GTTTCTCGCG GCAGTCGGCG AAATGCCGGA GGCCAGCGGC
GTCGCGCTCG GCTTCGACCG CCTGGTGATG CTGGCGGCCG GCGCAACCAC GATCGATCAG
GTGGTGTGGA CGCCGCCGGC AGGCGAGGAC GCATGA
|
|---|
| Protein sequence | MEATSQPSPW WNRDRYLDRQ PFLRARGGVT RAVRAWFEAA GFTEVETAIL QISPGNETHL
HAPRTELLGP DGERRIRYLR TSPEFACKKL LAAGETRIFE LARVFRDRER GRVHLPEFTM
LEWYRAEAPY QQVIDDCIAL VRVAAEATGI ATFSFRGRRA DPQAEPERLT VADAFARFAG
IDLLATIAKG EGDRTALANA AAARVRIAED DTWSDIFSKV LVEHVEPRLG DGRLTVLSEY
PAPEAALART KPDDPRVAER FELYACGVEL ANGFGELTNA AEQRERFMAA MDEKERRYGE
RYPLDEAFLA AVGEMPEASG VALGFDRLVM LAAGATTIDQ VVWTPPAGED A
|
|---|
| |