| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2780 |
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| Symbol | |
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| ID | 6410444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3022563 |
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| End bp | 3024368 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712656 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_001991764 |
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| Protein GI | 192291159 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA TGCTCGCAGA ACCCCAGGCG GCCCCGAAGT TCGATCCTGA CGCGTTCGCC
CGCAATCTCG CGCAGGCGAT GGAGACCGGT AGCCAGGCCT TAGCGACGAT GATGAAGTCG
CAAAACGGTG CCGTGCCACC GGACGGTCAT CCGCCCGCCG GTCTGACCGA AATGGTGAAG
AGCTTCTCGA GCGTCGCCAA TTACTGGCTA TCCGACCAGG CCCGTTCTCA TGAGCTGCAG
CAGCGGCTCG GCAAGTCGTA TCTCGAACTC TGGGGCGCGG CCTCCAAGCG CCTCGCCGGC
GAACAGGCCG AGCCGGCGAT CGCCCCCTCG CCGCGCGACA AGCGGTTCGC CTCACCGGAA
TGGAAGGCCA ACGCGTTCTA CGATTTCCTG ATGCAGGCCT ACCTGCTGAC GACGCAGTGG
GCCGACGAAC TGGTCAAGAA CGCCGAGATC GACCCGCACA CCAAGCGCAA GGCCGCGTTC
TACGTCCAGC AGCTCACCAC CGCTTTGGCG CCCTCCAACT TCGTGATGAC CAATCCGGAG
CTGACGCGCC AGACGCTGGA GGCCAGCGGC GACAATCTGG TGCGCGGCAT GAAGATGCTG
GCCGACGACA TCCAGTCAGG CCGCGGCCAT CTGAAGATCC GGCAGTCCGA TCCGGCCGGG
CTCGAGGTCG GCGTCAACAT GGCGGTCACC CCGGGCAAGG TGATCTTCCA GAACGAAATC
ATGCAGCTCA TCCAGTATGA GCCCGCCACC GCGACGGTGC AGCGCACGCC GCTGCTGATC
GTGCCGCCGT GGATCAACAA GTACTACATT CTCGATCTGA AGCCCGAGAA GTCGTTCATC
AAATGGTGCG TCGACCAGGG CCTCACCGTG TTCGTGATCT CCTGGGTCAA CCCGGACAAG
AGCCTCGCCG ACAAGGACTT CGCCGACTAC ATGAAGCTCG GCCCGCTGAC CGCGATGGAC
GTCGTCGAGA AGGTCACCGG CGAGATGAAG GTCCACACGC TGGGCTACTG CGTCGGCGGC
ACCCTGCTCG CCTCGACGCT GGCCTGGCTC GCCGAGCGCC GCCGGGTCCG CGTTACCTCG
GCGACCTTCC TGACCACGCA GGTCGACTTC ACCCATGCCG GCGACCTGAT GGTGTTCGTC
GACGAGGAGC AGATTTCCGC GGTCGAACGC GAGATGAAGG TCACCGGCGT GCTCGAAGGC
GCCAAGATGG CGATGGCCTT CAACATGCTG CGGCCGAACG ATCTGATCTG GTCCTACGTC
GTCAATAACT ACCTGAAGGG CCAGCCGCCG CAGGCGTTCG ACCTGCTGCA CTGGAATTCC
GACGCCACCC GGATGCCGGC GGCGAACCAC TCCTACTACC TGCGCAACTG CTATCTCGAC
AACAAGCTGT CGGCCGGCAC CATGGTGCTG GACAACACCA CGCTCGACCT CACCAAGGTC
AAGGTGCCGA TCTACAACCT CGCCACCCGC GAAGATCACA TCGCGCCGGC GGAGTCGGTG
CTGTACGGCT CGCAGTTCTT CGGCGGTCCG GTGAAATTCG TGCTGTCCGG CTCCGGCCAC
ATCGCCGGCG TGATCAATCC GCCGGTGGCG AACAAGTACC TATTCTGGAC CAACCCCGAC
ATCTTCGCCG GCTCGGTCGC CAATTGGCTG AACGGCGCCG AAGAGCACAA GGGGTCGTGG
TGGCCGGATT GGCGCGCTTG GATCGGCCAG TTCGACGACG AACAGGTTCC CGCCCGCGCC
ATCGGCAACG AAGCCTACCC GCCGCTGGAA GATGCGCCGG GCAGCTACGT CAAAGTGCGA
TCCTGA
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| Protein sequence | MTDMLAEPQA APKFDPDAFA RNLAQAMETG SQALATMMKS QNGAVPPDGH PPAGLTEMVK
SFSSVANYWL SDQARSHELQ QRLGKSYLEL WGAASKRLAG EQAEPAIAPS PRDKRFASPE
WKANAFYDFL MQAYLLTTQW ADELVKNAEI DPHTKRKAAF YVQQLTTALA PSNFVMTNPE
LTRQTLEASG DNLVRGMKML ADDIQSGRGH LKIRQSDPAG LEVGVNMAVT PGKVIFQNEI
MQLIQYEPAT ATVQRTPLLI VPPWINKYYI LDLKPEKSFI KWCVDQGLTV FVISWVNPDK
SLADKDFADY MKLGPLTAMD VVEKVTGEMK VHTLGYCVGG TLLASTLAWL AERRRVRVTS
ATFLTTQVDF THAGDLMVFV DEEQISAVER EMKVTGVLEG AKMAMAFNML RPNDLIWSYV
VNNYLKGQPP QAFDLLHWNS DATRMPAANH SYYLRNCYLD NKLSAGTMVL DNTTLDLTKV
KVPIYNLATR EDHIAPAESV LYGSQFFGGP VKFVLSGSGH IAGVINPPVA NKYLFWTNPD
IFAGSVANWL NGAEEHKGSW WPDWRAWIGQ FDDEQVPARA IGNEAYPPLE DAPGSYVKVR
S
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