| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2765 |
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| Symbol | |
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| ID | 6410429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3006442 |
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| End bp | 3008493 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712641 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001991749 |
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| Protein GI | 192291144 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.170843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGG CATTGAAGGC AAGCTCGAAA TCGAAATCCG GCGACGACCT GTTCGAAGGG
GCGCCGAAGT CTGCCGCGCC CAAGGCGCCG GCCAAGCCGA GCGGCGCCGA GGATGGTTAT
ACCGCCGCGG ACATCGAGGT TCTGGAGGGG CTTGAGCCGG TCCGGCGCCG GCCCGGCATG
TATATCGGCG GCACCGACGA GAAGGCGCTG CACCATCTGT TCGCCGAGGT GATCGACAAC
TCGATGGACG AGGCGCTGGC TGGCCACGCC ACCTTCATCG AGGTCGAGCT GACGGCCGAC
GGCTTCCTCA CCGTCTCTGA TAACGGACGC GGCATTCCCG TTGATCCGCA TCCGAAATTT
CCGAAGAAGT CGGCGCTCGA AGTGATCATG TGCACGCTGC ACGCCGGCGG CAAGTTCGAC
AGCAAGGTGT ACGAGACCTC GGGCGGTCTG CACGGCGTCG GCGTCAGCGT CGTCAATGCG
TTGTCGTCGC GTCTTGAGGT CGAAGTGGCG CGCGGCCAGC AGCTCCACCG CATGGTGTTC
GAGCGCGGCC ACCCCAAGGG CAAGCTCGAG AGCCTCGGCA AGGTCAACAA CCGCCGCGGC
ACCCGCGTCC GCTTCAAGCC GGACACCGAC ATCTTCGGCG CCAAGGCGGC GTTCAAGCCG
CAGCGGCTGT TCAAGATGGC GCGGTCGAAG GCGTATCTGT TCGGCGGCGT GAAGATCCGT
TGGAAGTGCG ATCCGGAACT GCTGAAGGGC ATCGAGGACG TTCCGGCCGA GGATGAATTC
CATTTTCCCG GTGGCCTGAA GGACTTCCTC GGCGCGGCGA TCCACAACGA CACGCTGGTG
CACCCGGACA TCTTCGCCGG CAAATCCGGT CGCAATGGCG CGCACGGCGC CTGCGAATGG
GCGGTGGCCT GGACGGCCGA TGCCGACGGC TTCCTGTCGT CCTACTGCAA CACCGTCCCG
ACACCCGATG GCGGCACCCA CGAGTCGGGC TTGCGCAGCG CCCTGCTCCG CGGTCTGAAG
GACCACGCCG AACGTGCCGG CCAGGGCAAG CGCGCCTCCT CGATCACCTC CGAAGACGTG
ATGGTCGGTG CTGCGATCAT GCTCAGCGTG TTCGTGCGCG AACCTGAATT CCAGGGCCAG
ACCAAGGACC GCCTCGCCAC CGCCGAGGCG CAGAAGATCG TCGAACAGGC GATCAAGGAC
CCGTTCGACC ACTGGCTGTC CGGCAATCCG GTCCAGGCCA ACAAGCTGCT CGATTTCGTC
ATCGAGCGCG CCGAGGAGCG GCTGCGCCGC CGCCAGGAAA AGGAAATCTC GCGCAAGACC
GCGGTGAAGA AGCTGCGGCT GCCGGGCAAG CTGGCCGACT GCACCTCGAC CGCGGCCGAA
GGCTCCGAAC TGTTCATCGT CGAGGGCGAC TCGGCCGGCG GCAGCGCCAA GCAGGCGCGC
GACCGTTCGA CCCAGGCGGT GCTGCCGCTG CGCGGCAAGA TCCTCAACGT CGCCTCCGCC
GGCAAGGACA AGGTGGTGGC GAACGCCCAG CTGTCGGACC TGATCCAGGC GCTCGGTGTC
AGCACCGGGG TGAACTACCG CGAGGAAGAT CTGCGCTATT CGCGCATCAT CATCATGACC
GACGCCGACG TCGACGGCGC CCACATCGCC TCGCTGCTGA TCACCTTCTT CTATCGGCAG
ATGCCGAAGC TGATCGACGA GGGCCACCTC TATCTCGCGG TGCCGCCGCT GTACCGCCTG
ACCCACGGCG CCAAGACGGT GTACGCGCGC GACGACGCCC ACAAGGAAGA GCTGCTGAAG
AAGGAGTTCA ATGCCAACGC CAAGGTCGAA GTCGGCCGCT TCAAAGGCCT CGGCGAGATG
ATGCCGGCGC AGCTCAAGGA AACCACGATG GATCCGGCCA AGCGGACCAT GCTACGCGTG
GTGCTGCTCC CCGACGACCG CGACGGCACC GCCAATTCGG TCGAGCGACT GATGGGCACC
AAGGCCGAAG CCCGCTTCGC CTTCATCTCC GAGAAGGCCG AATTCGCCAG CGACGAGCTG
CTGGACGTGT GA
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| Protein sequence | MAKALKASSK SKSGDDLFEG APKSAAPKAP AKPSGAEDGY TAADIEVLEG LEPVRRRPGM
YIGGTDEKAL HHLFAEVIDN SMDEALAGHA TFIEVELTAD GFLTVSDNGR GIPVDPHPKF
PKKSALEVIM CTLHAGGKFD SKVYETSGGL HGVGVSVVNA LSSRLEVEVA RGQQLHRMVF
ERGHPKGKLE SLGKVNNRRG TRVRFKPDTD IFGAKAAFKP QRLFKMARSK AYLFGGVKIR
WKCDPELLKG IEDVPAEDEF HFPGGLKDFL GAAIHNDTLV HPDIFAGKSG RNGAHGACEW
AVAWTADADG FLSSYCNTVP TPDGGTHESG LRSALLRGLK DHAERAGQGK RASSITSEDV
MVGAAIMLSV FVREPEFQGQ TKDRLATAEA QKIVEQAIKD PFDHWLSGNP VQANKLLDFV
IERAEERLRR RQEKEISRKT AVKKLRLPGK LADCTSTAAE GSELFIVEGD SAGGSAKQAR
DRSTQAVLPL RGKILNVASA GKDKVVANAQ LSDLIQALGV STGVNYREED LRYSRIIIMT
DADVDGAHIA SLLITFFYRQ MPKLIDEGHL YLAVPPLYRL THGAKTVYAR DDAHKEELLK
KEFNANAKVE VGRFKGLGEM MPAQLKETTM DPAKRTMLRV VLLPDDRDGT ANSVERLMGT
KAEARFAFIS EKAEFASDEL LDV
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