| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2758 |
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| Symbol | |
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| ID | 6410422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3001387 |
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| End bp | 3002892 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712634 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_001991742 |
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| Protein GI | 192291137 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.224771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATCGA TCGGAAGGGC CTGTACGCGG CACGGAGCTG CACTGTTCGC GGCCGTCGCC
TGTGTGCTTG CGCTGCTGGT CGCCGGCCCC GCATCGGCTG CGAAGCGGGT GGCGCTGGTG
ATCGGCAACG ACGATTACCG CAACGTCCCC AGGCTGCAGA AGGCGGTGAA CGACGCGCGC
ACCATTGGCG ATGCGTTGAA GACCCTCGGC TTCCAGGTGA TGGTGGCCGA AAACCAGACC
CGCGCCGCGT TCAGCCAGAG CCTGCTGGCG TTCGACACCA CCATCGAACC CGGCGACACC
GCGTTCTTCT TCTACGCCGG CCATGGCTTC GAGATCGCGG GGCAGAACTA CCTGCTGCCG
ATCGACGTGC CGGCTGCCAC TGAAGGCCAA GAAGAACTGG TGCGCGACGC CTCGATCATG
GCGGACCGCA TCATCGACCG GCTGCAGAAC CGCGGCGCGC GCACCGCCAT CCTGGTGCTC
GACGCCTGCC GCAACAATCC GTTCGAGCGC CGCGGCGTGC GCGCGCTGGC CGGGCGCGGC
GGGCTCGCGC CGATGACGAC GCTGCCTGAA GGCGTGTTCT CGATCTTCTC GGCCGGTCCG
CGGCAGACCG CGCTCGATCG GTTGTCCGAC ACCGACAGCA ATCCGAACTC GGTTTTCACC
CGGGTGTTCG TGAAGCAGTT GCTCGATCCC GGCGAAAACC TGGTGCAGGT CGCGCAGCGC
ACGCGGCGCG CCGTCAGCGA GATGGCCGAC ACCGTCGGCC ACAAACAGGT CCCGGTGTAT
TTCGACCAGA TGGTCGACGA CGTCTTCCTG AACGGTCGTC CGCAGCCCAG CGCCGCGGCG
ACCGAGCCTT CTCAGAAGGT CGCTGCACTG CCTCCGGTGG CGCCGTTGAA GCCGCCGGCT
TCGGAAGCGC TGAACGCGCC GATCGCCAGC TTCTCCCGGC ACAATGGCGG CTGGACGGTG
TCGTTCTCGA TCGCTGATCC GACGCTCGGC ATCTCGTGGC GAATGGGCGA GGGCGCGTTC
CGCGAAACCG GCTTCATGGA CGCGCTCGAT CCGCGCACCC GCAAGCGGAT GCCGAATCCG
TCGATCCAGC TTCCTGCGGA TGCGCCGGCC GGCACCATCG AGCTGCGCTA CATCGACGCG
CAGGGCGAGA TGCAGGGGCC GTTCCCGATC AAGTTCGAAC CAGAGGCGGC ACTGATCCGC
GATCAGCGCA AGATCCTCGA TATGACGGCG ACGAGCTGGC TGTCGTTCCG CGACTACAAT
GGCCTGCTGG TGTACTACAC GCACCTGATG TCCTACCGCT GCGCGATCCG GGAAGTCCGG
ATCGGGATCG ACAGTGCGGT GCCCGACAAG GTGCTAAAGA TGCCGCCCTG CGACATGCGC
GATCCGATCG CAATCCCGAG CAGCGCGCAG CCCTATCTGA AGCTGGCGCC GAACGTGACG
TCGGTCTCGG TGGAGCTGAC TTACCGCGAT GGCAGCGTGT CGGAGATCAA GACGTTCCGC
CGGTGA
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| Protein sequence | MRSIGRACTR HGAALFAAVA CVLALLVAGP ASAAKRVALV IGNDDYRNVP RLQKAVNDAR
TIGDALKTLG FQVMVAENQT RAAFSQSLLA FDTTIEPGDT AFFFYAGHGF EIAGQNYLLP
IDVPAATEGQ EELVRDASIM ADRIIDRLQN RGARTAILVL DACRNNPFER RGVRALAGRG
GLAPMTTLPE GVFSIFSAGP RQTALDRLSD TDSNPNSVFT RVFVKQLLDP GENLVQVAQR
TRRAVSEMAD TVGHKQVPVY FDQMVDDVFL NGRPQPSAAA TEPSQKVAAL PPVAPLKPPA
SEALNAPIAS FSRHNGGWTV SFSIADPTLG ISWRMGEGAF RETGFMDALD PRTRKRMPNP
SIQLPADAPA GTIELRYIDA QGEMQGPFPI KFEPEAALIR DQRKILDMTA TSWLSFRDYN
GLLVYYTHLM SYRCAIREVR IGIDSAVPDK VLKMPPCDMR DPIAIPSSAQ PYLKLAPNVT
SVSVELTYRD GSVSEIKTFR R
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