Gene Rpal_2749 details

Gene Information

• Locus tag: Rpal_2749
• ID: 6410413
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2989392
• End bp: 2991356
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642712625
• Product: hypothetical protein
• Protein accession: YP_001991733
• Protein GI: 192291128
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGCC GCGATTTTCT GCTCGGAGCT GCGGCCATCG GATTAGGTGG ACCGTTGCTA 
GCGAAAGCAG CGATCTCGTC GTTGCATGCG CAGCCTGCAG CGCCGAAAGG CGCGAAGATC 
GCCAAGGTCG CGATCTTTCC GGCGATCGGT TTCTCCCGCG TCGGCAATGC CGAGGACTGG 
TTCCTGGCGC CGGAAGTGCC CGGCCTGCTC GACGAGCCCG AGGGCGGCTT CAAGGACAAG 
CAGGGCCGTA TCAAGAAACA GGTGCAGCGC TTCCGGCTGT TCGGCTACGA CGACCAGGGC 
CGCGTGGTGC GCGAACTCGA TGGCACCGAT GGTGTGACCT GGAGCGTCCA CGTCGCCAAC 
ACCAAGGCGG CCTGGTACGG CTTCGTCAAC GCGATGGATC GCGGCGACAC CGCGCCCGGC 
GTGCCCGGCG CGCAACGCAA CGCCTTTGTC GCGGCGGACA AGCGCGAAGC GATGCTGTGC 
ATCGACGCCG GCAAGCTGGA GATCTCCGGC GCCTCGACAA ACCCCAAGGG CGGCGACGAC 
AAGTATCGGA TGAAGGGCCG GTTTTGGCAG ACGCTCGACG TCTCGCTTGG CCATCTGCGC 
ACCGACGACA AGGGGCGCCT GCTGGTGTTC GCCGCCGACG GCGTCTCGCG CACGGCGCTG 
CCGCAGAATC CGGTGCGCGA CTTCACCAAC AATGACGGCT GGCACGACGA CTGGGCCGAC 
GGCTGGGTCA AGGCGACCGT TACCGTCGAC GGCCAGAAGC TCGATTGCGA TCCCGCCTGG 
GTGGTGTGCT GCGGACCGAA ATTCGCGCCG CAGCTCGAGC CGATCGTGAC GCTGTACGAC 
GCCGCGCGCG AAGCGATGGT GGCGCTCGGC CAGATGCACA GCCCGACCGA CAAGGTCTCG 
TTCCGCCGCG ATGTGTTGCC GATCCTGCGC CGCGCCGGCG CGATGCAGTG GGTGGCTACG 
GCGTCGTTCC TCGGCGCGGC CTGGAACGAC ATCGGTGATC TGTCAAACCC GGCAACGATC 
GAGACGCTGG CCAAGCCCAG CGCCGATGCC AAGGCCGAGC GAAAGAAGGT GTTCGATGCG 
TTCCGCAAGC CGGACGGCAG CGACCAGCGC GGCTACGCGA TTCCGATCAT GCTCGGCGAT 
GGTGTCAACT ATCAGGACAG CCCGCACGCC TGGCTGGCGC TGACGCAGAC GCAGTATCGC 
GTGCTTGAAC TGTGGGCCGA CGGCAAGTTC GAGGCGGACT ACGCTGATAA GAGCGCGGAC 
TCGGTTCGCA CGCTCGACGA TCTGCCGATC GAACTACGCC CCGAGGCGAT GACGCGCGCC 
GCGCTCGATG CCTGCTCGGG CGGTGCGTTC CATCCCGGCG TCGAGATTAC CTGGCCGATC 
CGCCACAAGG AGCTGTATCG CGGTCCGAAC GAGACCAAGC TGCCGTTCCG CCTGGCGCTG 
TCGAACCGCA AGAACTTGGC GCAGGATGTC GGGCTGCAGC TCAATCCGGT CAACGTGTTC 
GCCGGCAATC CCGACAAGCC GGATCAGGGC AGGCCGATCG GCCCGCAGGC GCCGGGCGAT 
CTGACGCGCT GGATGGGCGT GCCGTGGCAG GGCGATGCGT TCAGTTGCCA GGCGGTGCTC 
ACGGCCAGCG GCTTCCCGAC GCCGGTGTGG TGGCCGGCGC TGCTGCCGGT CGATGTGCTG 
CCCGAGGCGT TCTATCAGCA GATGATGCGC ACCGATCTGA CCGAAGAAGA ACGGCTGCGG 
TTCTATCACA CGCGGGTGCC GTGGGCGCGC GGAGCCGCGG GCATCGGATT GCACGTCGAA 
GCCGGCTACA CCGACGGCCT GCGCCGGATG ATCGAGCTGT GGACGCAGAT GGGCGTGGTG 
GTGCGTCGCC CGGGTCCGAA GGGGCTGCCT GGAGTCCCCG ACCAGCTTTA CGTCGAAGTC 
CAGCGCGGCT CGATGGACAT CGCAGCGCAG ACGCTGTCGC GCTGA 

 

Protein sequence

MKRRDFLLGA AAIGLGGPLL AKAAISSLHA QPAAPKGAKI AKVAIFPAIG FSRVGNAEDW 
FLAPEVPGLL DEPEGGFKDK QGRIKKQVQR FRLFGYDDQG RVVRELDGTD GVTWSVHVAN 
TKAAWYGFVN AMDRGDTAPG VPGAQRNAFV AADKREAMLC IDAGKLEISG ASTNPKGGDD 
KYRMKGRFWQ TLDVSLGHLR TDDKGRLLVF AADGVSRTAL PQNPVRDFTN NDGWHDDWAD 
GWVKATVTVD GQKLDCDPAW VVCCGPKFAP QLEPIVTLYD AAREAMVALG QMHSPTDKVS 
FRRDVLPILR RAGAMQWVAT ASFLGAAWND IGDLSNPATI ETLAKPSADA KAERKKVFDA 
FRKPDGSDQR GYAIPIMLGD GVNYQDSPHA WLALTQTQYR VLELWADGKF EADYADKSAD 
SVRTLDDLPI ELRPEAMTRA ALDACSGGAF HPGVEITWPI RHKELYRGPN ETKLPFRLAL 
SNRKNLAQDV GLQLNPVNVF AGNPDKPDQG RPIGPQAPGD LTRWMGVPWQ GDAFSCQAVL 
TASGFPTPVW WPALLPVDVL PEAFYQQMMR TDLTEEERLR FYHTRVPWAR GAAGIGLHVE 
AGYTDGLRRM IELWTQMGVV VRRPGPKGLP GVPDQLYVEV QRGSMDIAAQ TLSR