| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2732 |
|---|
| Symbol | |
|---|
| ID | 6410396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2968935 |
|---|
| End bp | 2969828 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642712608 |
|---|
| Product | 6-phosphogluconate dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001991716 |
|---|
| Protein GI | 192291111 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGCG TTCCCCAAAC CCGCGTCGCC TTCCTCGGCC TCGGCAAGAT GGGCCACGGC
ATGGCCGGCC GCCTGCTCGA AGCCGGCTTC GACGTCGCGG TGTGGAATCG CAGCAGGGCC
AAGGCGGACG ACCTGATCCG CCGCGGCGCG CGATGGGCTG ACAGCCCGGC TGAAGCAGCG
CGCGACGCGC GCGCCATCCT CACAATGGTC GCCGACGATG CTGTCTCGCA GGCGGTGTGG
CTCGGCCCCG ATGGCGCGGC GACGACCGCC GCCGCAGGGA CGCTGGCGAT CGAATGCTCG
ACGGTGTCGC ATCGGCATGC GCTCGATATG GCTGCTACGC TCCGTGCGCG AGGCCTCGTC
TATATCGATT GTCCGGTGAC CGGACTTCCC GATGCTGCTG CACGCGGCGA GCTGACGCTG
CTGATCGGCG CTGAGCCGGC GGACCTTGAT CAGGCCCGGC CGTTTCTCGC GCCGCTGAGC
CAGACGATCC GCCATTTCGG CCCGGTCGGT GCCGGCACGG TCTACAAGCT GATCAACAAT
CTGATGGGCG CGATCCAGAT CGCCGGCATC GCCGAGGGCA TCGCGATCGC CGAACAGGCC
GGCCTCGATA TGGCGCTGGT GCGCGAGGCG ATCCTCAGCA GCGTGGTGGC AAGTCCGCAG
GTGCTGCGCC ATGCGCCCCG CATGATCGCC CGCGACTTCA GCAATCCGAC CTTCACGGCC
GCGCTCCGGC ACAAGGATGC GCGCTACGCG GCCGAACTCG CCGAGACGCT GCGATTGGAG
CTGCCTCTGT CGCGTGCCGC GGTGGCAAGT TACGCGCGCG CGACCGATGC GGCGCCGGAC
GACGATGAGG GCAGGATCGT CGAAGTGGTG TCGAAGCCGC ATCCGCGCGA CTAA
|
|---|
| Protein sequence | MAGVPQTRVA FLGLGKMGHG MAGRLLEAGF DVAVWNRSRA KADDLIRRGA RWADSPAEAA
RDARAILTMV ADDAVSQAVW LGPDGAATTA AAGTLAIECS TVSHRHALDM AATLRARGLV
YIDCPVTGLP DAAARGELTL LIGAEPADLD QARPFLAPLS QTIRHFGPVG AGTVYKLINN
LMGAIQIAGI AEGIAIAEQA GLDMALVREA ILSSVVASPQ VLRHAPRMIA RDFSNPTFTA
ALRHKDARYA AELAETLRLE LPLSRAAVAS YARATDAAPD DDEGRIVEVV SKPHPRD
|
|---|
| |