| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2730 |
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| Symbol | |
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| ID | 6410394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2965180 |
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| End bp | 2967678 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712606 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_001991714 |
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| Protein GI | 192291109 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTTC TGCTGCGTTT CTTCGGCTTC CTGTTCGCGG CCGGAACGAT CGTGTTCCTG
GTCGGCGTCG CAGCCGCCGC CGGGCTGATC TGGCATTTCT CCAAGGACCT GCCGGACTAC
TCGCAGCTGC AGGACTACGA ACCGCCGGTG ATGACGCGAA TCCATGCGTC CGACGGATCG
CTGCTCGCCG AATACGCCAA GGAGCGCCGG TTGTACCTGC CGATCCAGGC GGTGCCGAAG
CTGGTGATCA ACGCGTTCCT CGCCGCCGAA GACAAGAATT TTTACGAGCA CGGCGGCATC
GACTATCAGG GCATGGCGCG CGCCGCGCTG CTGTACGCGC AGAACATCGG CACCAACCGC
CGGCCGCAGG GCGCCTCCAC CATCACCCAG CAGGTCGCCA AGAACTTCCT TCTGACCAAC
GAGGTGTCGT TCACCCGCAA GATCAAGGAA GCCTTGCTGG CGATGCGGAT CGAGCGCGCC
TATTCCAAGG ACAAGATCCT CGAGCTGTAT CTCAACGAGA TCTATCTGGG CCTCGGCGCC
TACGGCATCG CCGCGGCGTC GCTGGTCTAC TTCGACAAGT CGGTCAACGA ACTGACGGTC
GCGGAAGCGT CGTATCTGGC GGCGCTGCCG AAGGCGCCCG CAGCGCTGCA CCCGATCCGC
AACCACGACC GCGCCGTCGA GCGCCGCAAT TACGTGATCG ACCGCCTGGT CGAGAACGGC
TGGATCAACC AGGCCGACGC CGACAAGGCG CGCAAGTCGC CGCTCACCGT CACCAACCGT
GGCAACGCCG CGCACACCTT CGCGGGCGAA TACTTCGCCG AAGAAGTCCG CCGCGACATC
TTCGAGCGCT ACGGCGAGAA GAAGCTGTAC GAGGGCGGCC TGTCGGTGCG CACCACGCTC
GATCCGAAGC TGCAGATCGA AGCGCGCAAG ACCATGGTCG CAGGCCTCGT CCGGTTCGAC
GAAGCGCGCG GCTGGCGCGG GCCGGTCACC AAGCTGGAAA TCGCCGGCGA CTGGGGCGTC
AAGCTCGCCG ACGTGAAAGC GCTCGCCGAC ATCACGCCGT GGCGGATGGC GGTGGTGCTG
GAGACCTCCG ACCAATCGGC GCGGATCGGA CTTCAGCCTG GCCGCGAACT CGGCGGCGCG
ATCTCCAAGC AGCGCGAGAC CGGTCTGGTC ACGCTCGAAG GCGTCAAATG GGCCAAGCCG
GCCGCCGGCC CGTCGCGCGG CAAGACCCCG CGCACGGTGT CGGAAGTGCT GTCGCCGGGC
GAGGTGATCT ATGTCGACCC GCTGCTCGAC AAGGACGGCA AGGCAATCGA GGGCCAGTAC
CGCCTGCGGC AGCTGCCAGA AGTCTCCGGC GCGATGGTGG TGATGGACCC GCTGACCGGC
CGCGTGCTGG CGATGGTCGG CGGCTTCTCG TTCGACCAGA GCCAGTTCAA CCGCGCCACT
CAGGCGTATC GGCAACCGGG TTCGTCGTTC AAGCCGCTGG TGTATTCGGC GGCGATGGAC
AACGGCTACA CTCCGTCGAC GGTGGTGATT GACGCCCCGA TCGAAATCGA CCAGGGGCAG
GGCGTCGGCG TGTGGCGTCC TGAGAACTAC TCGACCGGTA AGTATTACGG CCCGACCACG
TTGCGCAACG CGCTGCAGCG CTCGCTCAAC ACCGTGACGG TGCGGCTGGC GCAGGACATC
GGCATGCCGT TGATCGGCGA ATACGCCAAG CGGTTCGGCG TCTATGATGA CCTGCCGAAC
TATCTGTCGT ATGCGCTCGG CGCCGGTGAA ACTACGGTGA TGCGGATGGT CACCGCCTAT
TCGATGTTCG CCAATGGCGG ACGGCGGGTG AAGGCGACGC TGATCGACCG CATCCAGGAC
CGCTACGGCC ACACTATCTT CAAGCACGAT CAGCGCGAAT GCCGCGGCTG CGAAGCGCCC
AACGGCTGGA AGAACCAGCC GGAGCCTCAG CTCGTCGACC GCCGCGAGCA GGTGCTCGAT
CCGATGACCG CCTACCAGAT CACGTCGATG ATGGAAGGCG TGGTTCAGGC CGGCACCGCG
ACGGTGCTGC GCGAGGTCGG AAAGCCGATC GCCGGCAAGA CCGGCACCAC CAACGACGAG
AAGGACGCCT GGTTCATCGG CTTCTCGCCG GACCTCGTTT GCGGCGTCTA TATCGGCTAC
GACAAGCCGC GCAATCTCGG CCGCGGTGCG ACCGGCGGCC ATCTCGCGGC GCCGATCGCC
AAGGACTTCT TCAAGCTCGC GCTCGCCGAG AAGCCCGCGG TGCCGTTCCG CGTGCCGGCC
GGCATCAAGC TGGTCCGGGT CGACGCCAAG AGCGGCATGC GTGCCGGCCC GGGCGACGGC
CGCACCATCC TCGAAGCGTT TAAGCCGGGC ACCGCGCCGC CGGACAATTA CGCGGTGATC
GGCGTCGCCG ACGCCGACGC GCGCCAGCAG CAGCAACAGC AGATGGCGCC GCCGGACGAT
CGCGGCTTCA TGCGGCCGGG CACCGGCGGG CTGTACTAG
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| Protein sequence | MRFLLRFFGF LFAAGTIVFL VGVAAAAGLI WHFSKDLPDY SQLQDYEPPV MTRIHASDGS
LLAEYAKERR LYLPIQAVPK LVINAFLAAE DKNFYEHGGI DYQGMARAAL LYAQNIGTNR
RPQGASTITQ QVAKNFLLTN EVSFTRKIKE ALLAMRIERA YSKDKILELY LNEIYLGLGA
YGIAAASLVY FDKSVNELTV AEASYLAALP KAPAALHPIR NHDRAVERRN YVIDRLVENG
WINQADADKA RKSPLTVTNR GNAAHTFAGE YFAEEVRRDI FERYGEKKLY EGGLSVRTTL
DPKLQIEARK TMVAGLVRFD EARGWRGPVT KLEIAGDWGV KLADVKALAD ITPWRMAVVL
ETSDQSARIG LQPGRELGGA ISKQRETGLV TLEGVKWAKP AAGPSRGKTP RTVSEVLSPG
EVIYVDPLLD KDGKAIEGQY RLRQLPEVSG AMVVMDPLTG RVLAMVGGFS FDQSQFNRAT
QAYRQPGSSF KPLVYSAAMD NGYTPSTVVI DAPIEIDQGQ GVGVWRPENY STGKYYGPTT
LRNALQRSLN TVTVRLAQDI GMPLIGEYAK RFGVYDDLPN YLSYALGAGE TTVMRMVTAY
SMFANGGRRV KATLIDRIQD RYGHTIFKHD QRECRGCEAP NGWKNQPEPQ LVDRREQVLD
PMTAYQITSM MEGVVQAGTA TVLREVGKPI AGKTGTTNDE KDAWFIGFSP DLVCGVYIGY
DKPRNLGRGA TGGHLAAPIA KDFFKLALAE KPAVPFRVPA GIKLVRVDAK SGMRAGPGDG
RTILEAFKPG TAPPDNYAVI GVADADARQQ QQQQMAPPDD RGFMRPGTGG LY
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