| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2729 |
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| Symbol | |
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| ID | 6410393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2963650 |
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| End bp | 2964960 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712605 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001991713 |
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| Protein GI | 192291108 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.3202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCACGCC GCGCAAATCA TTTTGTTTTG TACTGTGCAA TCAGTGCGTG CGCTGCAGCA
TTTCTGTGTC TGGCGCCCTC CGTGCTGACG CCTGCCGTCG CCGAGACCGC TGCGCCCGCC
GTCGCTCCTG TTCCGACGTC TTTTCCGATC GCTTCCGACG CCCGCATCGC CGGTGATGAT
CACCAGACCC GCCTGATCGT CGATCTCGAC GGGAAGGTGC CGCTTCGTGC CTTCGCGCTG
GCCGACCCGT ACCGCGTCGT CATCGATCTG CCGCAAGTCA ATTTCCGGCT GCCGAAGGGC
ACTGGCGAAA GCGGGCGCGG CCTGATCAAG GCTTTCCGCT ACGGCCTCGT GATGCCCGGC
GGCTCGCGAA TCGTGCTCGA TCTCTCCGGG CCTGCCAAGA TTGCCAAGGC CGAGATGCTC
GATCCCGCCA ACGGCCAACC CGGCCGGATG GTGATCGATC TCGAATCGAT CGACCGCGCC
GCCTTCATGC AGGCGCTGCA GACCGCCGAG AACGTCGCCG AATTGCGCCC GACGGTGGCC
GGCACCGAGA CCACCGCGAC GGTGTCCCGG AGCGTGCCGC TGCCGAAGGT CGAGACCGAC
GATCCTCGCC CGGTGGTCGT GATCGACCCC GGCCACGGCG GTATCGACAA TGGTACCCAA
TCCGCCGATG GCGTTGCCGA GAAGACCATC GTGCTCGATT TCGCCGTCGC GCTCCGTGAC
CGGCTGGCGC AGCAGGGCAA ATTCCGGGTG GTGCTGACCC GTGCCGACGA TACCTTCATT
CCGCTCGGAG ACCGGGTGAA GATCGCACGC GAGCAGTCCG CCGCGCTGTT CGTCTCGATC
CATGCCGACG CGCTGCCGCG GCGGGAGGGC GACGCCCAGG GCGCCACCAT TTACACGCTG
TCCGACAAGG CTTCCGACGC CGAAGCGCAG CGGCTGGCCG ACGCCGAAAA CAAGGCCGAC
GCGATCGGCG GCGTCAATCT TACCGAAGAG CCGACCGAGG TCGCCGATAT CCTGATCGAC
CTGGCACAGC GCGAGACCAA GGCGTTTTCC AACCGATTCG CCCAGCAGCT GATGAAGGAC
ATGAAGGCGA CCACCCGGAT GCATAAGCGG CCGATGAAGT CGGCCGGCTT CAGGGTGCTG
AAAGCCCCCG ACGTGCCCTC GGTGCTGATC GAGCTCGGCT ACGTCTCCAA CAAGGCCGAT
CTGCAGTACC TGCTGTCTGA ACAGTGGCGC AGCAAGACCG TTGGCGCGGT CGCCCAGGCG
ATCGATTCGT TCCTGAGCAA GCGCTTGGTG ACGGCCGGTC CGCCGGGCTG A
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| Protein sequence | MARRANHFVL YCAISACAAA FLCLAPSVLT PAVAETAAPA VAPVPTSFPI ASDARIAGDD
HQTRLIVDLD GKVPLRAFAL ADPYRVVIDL PQVNFRLPKG TGESGRGLIK AFRYGLVMPG
GSRIVLDLSG PAKIAKAEML DPANGQPGRM VIDLESIDRA AFMQALQTAE NVAELRPTVA
GTETTATVSR SVPLPKVETD DPRPVVVIDP GHGGIDNGTQ SADGVAEKTI VLDFAVALRD
RLAQQGKFRV VLTRADDTFI PLGDRVKIAR EQSAALFVSI HADALPRREG DAQGATIYTL
SDKASDAEAQ RLADAENKAD AIGGVNLTEE PTEVADILID LAQRETKAFS NRFAQQLMKD
MKATTRMHKR PMKSAGFRVL KAPDVPSVLI ELGYVSNKAD LQYLLSEQWR SKTVGAVAQA
IDSFLSKRLV TAGPPG
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