Gene Rpal_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2719 
Symbol 
ID6410383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2950530 
End bp2951213 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content63% 
IMG OID642712595 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001991703 
Protein GI192291098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGA CTGCAGATGC GAAGTCGAAC ACCAAGATCC GCGCGGTTTC CGGCCCGCGC 
GGTCTTGCGA AGCATGAGAT CGTCGAAACG GCCGTGAGCC TGATGGAAGA GCTGGGAGAG 
GCGGCCTTCA GCGTGCGCAA ACTCGGCGAC AGAGTCGGCT GCGATCCGAT GGCGATCCTC 
TATCACTTCA AGAACAAGGA CGGCATGTAT CGCGCGATGG CCGATGCGCT GGTGGCGAAG 
CTCTCGCCGG TCGGCAACGA CCTGCCTTGG CAGGATCGGC TCCGCACCCA CGCGCGCGAT 
CATCGCGCGC TGGCGCTCCG ATATCCCAAC ACGTTTCCGC TGCTGCAGAG ATTTCTCAAC 
ACCGGCGTTG CCGACTTCCC CCATATCGAA ATGGTTCACC GCGCGCTGGC CGATGCCGGC 
GTGTCCGATG CGGACGCATC TGCCGTTTGC CTCGCCTGGT ACGCCGGCGT GATCGGTTTG 
TGCACGGCGG AGATCAGCGG GCTGGTCAGG CCGGCTCGCG AGTCCGAAGT CGCCGAAATG 
GAAGAGCTGC CGTCTGCCGA GTTTCCGGTG CTGAGGAAGC TGGCTCGCTC GTATCTGGCC 
GTCGAAACGG AAACCGTCTT CGAAATCGCC AACGAGCTGT TTATCGAAGG ACTATGCAGC 
CGCTCGGACC GCATGTCGGA CTGA
 
Protein sequence
MTSTADAKSN TKIRAVSGPR GLAKHEIVET AVSLMEELGE AAFSVRKLGD RVGCDPMAIL 
YHFKNKDGMY RAMADALVAK LSPVGNDLPW QDRLRTHARD HRALALRYPN TFPLLQRFLN 
TGVADFPHIE MVHRALADAG VSDADASAVC LAWYAGVIGL CTAEISGLVR PARESEVAEM 
EELPSAEFPV LRKLARSYLA VETETVFEIA NELFIEGLCS RSDRMSD