| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2702 |
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| Symbol | |
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| ID | 6410366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2933526 |
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| End bp | 2934953 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712578 |
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| Product | Beta-agarase |
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| Protein accession | YP_001991686 |
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| Protein GI | 192291081 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0145383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCGGCG TCAACGTGAC CGCGCTCCGG CCGTCCGAGG ATTTGCGCGG TCAACAGGGA
GCAGCGGCGC ACGGCGCCGA TCGTCACGAC GGAATGACTG AACTTGCACG CACGCGCTGG
GGCGGCCTTG CCGATCGCAA GGTCGACGCC AGCGGTTTCT TCCGGACCGA ACAGATCGAC
GGCGTATGGT GGTTCATCGA TCCGGATGGC GGACGTTTTC TGTCGAAGGG CGTGGTCTCG
GTGCAGTTCG ACCACGACAA CGTTCAGGGC ACGGATCGCC GGCCGTATCG CGAAGCCTGC
ACGCGTAAAT ACGGCAGCCG CGAAGCGTGG CGACGCGTCG CGGCGGACCG CCTCACCTCC
TGGGGCTTCA ACACGCTCGG CGCCTGGTCG GAGCCGGAGA TCGCACGCGC CGGCACCGTG
CCCCTCGCCT CCGCCGCCGG CGTCGTCTAT GTCGCGACCG CATTCGGCGA ACAGCGCGGC
GGCTGGCCGC TGTGCGACAT CTTCGAGCCG GAATTCGAAC AGTTCGCCCG CGCGCACGCG
CGTAAGGTCT GCACGCCGCA AAGCGACGAT CCGCATGTGC TCGGCTGGTT CACCGATAAC
GAGTTGCCAT GGGGACCGGA CTGGCGCGGG GAAAACGAAC TGCTGCCCAC CATCCTTCGC
GCGATGGACG CGCCATTCTC GCGGCGCGCC GCGCTTGCGC TGCTGAAAAG CCGCTACGAC
AGCATCGATC AGTTCAATGC GGCGTGGCAA TGCAAGCTGC CATCTTGGGA CGATCTCGCC
GCCACGCCGC TGCAGCCGCC GCCGTTCAGC CGCAACTTCT TCAGCAACGA CCGGGCGCAG
GAGCACGATC CGATCGCGCG CGGTTACTTC GCCGATTGCG ACGCCTTCGC CGGGCTGCTG
GCCGAGCGCT ACCTGTCGGT TTGCGCCACC GCGATCCGCG CTGCCGATCC AAATCACCTC
GTGCTCGGCG CCAGGTTCGC TTACGTGCCG CCGCGCGACG TCGTCGATGC TGCCGGCAGG
TATTGCGACG TAATCAGCGT CAATTGCTAC GATCCGCTGC CGGACGCGGT AATCGACGGC
TACGCCGAAA CCGGGCGGCC GTGCCTGATC GGCGAATACT CGTTCCGCGG CGACGATGCT
GGACTCCCCA ATACGCACGG CGCCGGTCCG CGGATGCCGA CGCAGCGGGA GCGCGCGGCA
GGATTCACGC GCTACACCAC CGCAGCGCTG CGCCATCCGG CGCTGATCGG CTATCACTGG
TTCGTCCACG CCGACCAGCC GGCGCAAGGC CGCTGGGACG GCGAGGACTC CAACTACGGC
GTGGTGACGA TCGAAGACGA GGTCTATCCC GAGCTGACCC AGGCGATGAC GGCGCTCAAC
GCCGAGGCCG AACGGATTCA CGTCGAGACC GCGCCGGTGT TGGCCTGA
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| Protein sequence | MTGVNVTALR PSEDLRGQQG AAAHGADRHD GMTELARTRW GGLADRKVDA SGFFRTEQID
GVWWFIDPDG GRFLSKGVVS VQFDHDNVQG TDRRPYREAC TRKYGSREAW RRVAADRLTS
WGFNTLGAWS EPEIARAGTV PLASAAGVVY VATAFGEQRG GWPLCDIFEP EFEQFARAHA
RKVCTPQSDD PHVLGWFTDN ELPWGPDWRG ENELLPTILR AMDAPFSRRA ALALLKSRYD
SIDQFNAAWQ CKLPSWDDLA ATPLQPPPFS RNFFSNDRAQ EHDPIARGYF ADCDAFAGLL
AERYLSVCAT AIRAADPNHL VLGARFAYVP PRDVVDAAGR YCDVISVNCY DPLPDAVIDG
YAETGRPCLI GEYSFRGDDA GLPNTHGAGP RMPTQRERAA GFTRYTTAAL RHPALIGYHW
FVHADQPAQG RWDGEDSNYG VVTIEDEVYP ELTQAMTALN AEAERIHVET APVLA
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