| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2683 |
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| Symbol | |
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| ID | 6410346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2911316 |
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| End bp | 2912926 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712559 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001991668 |
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| Protein GI | 192291063 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACG AGTTCGACTA CGTCATCGTC GGTGGCGGCA GCGCTGGCTG TGTGCTCGCC
AACCGGCTGA GTGCCGATGG ACGCAATCGC GTCGTGCTTC TGGAAGCGGG CGGGCAGGGA
CGGCATCCGT CGTTTCATCT GCCGGTCGGA TACGTCTGGA ATCGCGCGCA TCCTCGCGGC
AACTGGCTGT ACCGGATCGA GCCGGAGGCT TCGAGCGGCA ACCGGCCGAT GCTGTGGCCG
CGCGGCAAGG TGCTGGGCGG CAGTTCGGCG ATCAACGGGC TGCTCTACAT CCGCGGGCAG
GCGCGCGACT ATGACGAGTG GCGCGACCTC GGCAATCGCG GCTGGGGCTG GGACGATGTG
TTGCCGTACT TCCGGAAAGC GGAGGATCAG GTGCGTGGCG CCGATGCGTT TCACGGCGTC
GGCGGGCCTC TCGGTGTATC CGATCCGACC ATCCGGCATC CGCTGTCGGA CGCTTATGTT
TCTGCGGCGG AGCAGGCTGG CCTCGCGGCA CGGGACGATT TCAATCGCGA CGTTCAGGCG
GGCGCCGGCT ACTTCCAGCT CACAGTGCGC AACGGACTGC GCGCCAGCAC CGCCAATGCC
TACCTGAAGC CGGCCCGTTC ACGAGCCAAT CTGGATGTCG TCACCGGAGC CCATGCCACC
AGCCTGATCT TCAAGGGCCG CCACGTGACT GGTGTTGCGG TGGTGCGCGA CGGCCGGGTC
GAGACTTATA CGGCGCGCCG CGAGGTCATC GTTGCGGCCG GCGCGGTCGC CAGTCCGGCA
CTGCTGCAGC ATTCCGGGCT CGGCGACGCC GATCATCTGC GCGCGTTGGG GATCGATGTC
GTGAGCCATC TGCCGGGCGT CGGACGCAAC CTGCAGGACC ATTATATGGT CAGCCTGATC
TACGACGTCA GGCGGCTCGG CAGCTTCAAT GAGACGGCGC GAGGTTGGCG TTTGGTGCGT
GAGGTGCTGC GCTACGCGGC GTCGCGTCGG GGGCTGCTGA CGCTGAGCGC ATCGCAGATC
AACGTGTTCC TGCCGACCAC GACCGATCCG GACAATCCCG ACGTCCAGTT CCACGTGATG
CCGGCGACCT TCAATTTCGA GACCGGAGAG GTCGAGCGAG AGCCAGGCCT TACCTGCGGG
GTGTGCCAGC TTCGTCCGCA CAGTCGCGGC ACTATTCAGA TCAGCCAGCG CGATCCGCTG
GCGGCACCGA CCATTCGCCC GCGCTATCTG ACCGACGACC ACGACAAGCG CGTGCTGCTC
GAAGGGCTGC GCTTCGCCCG CAAGATCGCG GCGCAGCCTG CGCTCGCTGA TATCGTCAGC
GAGCGTCTGC CGGGCGCGAA TGGCGGCAGC GACGCCGAAC TGCTGGAGTT CGCGCGGCAG
ACCGGCAAGA CGCTGTATCA CCCGGTTGGC ACCTGCAAGA TGGGCACGGA CGGCTCCGCC
GTCGTCGACA GCGAGCTGCG GGTGCGCGGC GTGTCCGGCC TGCGCGTGGT CGATGCCTCG
GTGATGCCGA CGCTGATCTC CGGAAACACC AATGCGCCGA CGATCATGAT CGCCGAACGC
GCTTCCGATC TCATCCTCGC CGACGCTCGT ACTCCGGAAC TGCAAGCATG A
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| Protein sequence | MSNEFDYVIV GGGSAGCVLA NRLSADGRNR VVLLEAGGQG RHPSFHLPVG YVWNRAHPRG
NWLYRIEPEA SSGNRPMLWP RGKVLGGSSA INGLLYIRGQ ARDYDEWRDL GNRGWGWDDV
LPYFRKAEDQ VRGADAFHGV GGPLGVSDPT IRHPLSDAYV SAAEQAGLAA RDDFNRDVQA
GAGYFQLTVR NGLRASTANA YLKPARSRAN LDVVTGAHAT SLIFKGRHVT GVAVVRDGRV
ETYTARREVI VAAGAVASPA LLQHSGLGDA DHLRALGIDV VSHLPGVGRN LQDHYMVSLI
YDVRRLGSFN ETARGWRLVR EVLRYAASRR GLLTLSASQI NVFLPTTTDP DNPDVQFHVM
PATFNFETGE VEREPGLTCG VCQLRPHSRG TIQISQRDPL AAPTIRPRYL TDDHDKRVLL
EGLRFARKIA AQPALADIVS ERLPGANGGS DAELLEFARQ TGKTLYHPVG TCKMGTDGSA
VVDSELRVRG VSGLRVVDAS VMPTLISGNT NAPTIMIAER ASDLILADAR TPELQA
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