Gene Rpal_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2666 
Symbol 
ID6410329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2896193 
End bp2896915 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID642712542 
ProductABC transporter related 
Protein accessionYP_001991651 
Protein GI192291046 
COG category[R] General function prediction only 
COG ID[COG4674] Uncharacterized ABC-type transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.297517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGC TGCAACTCCG CGGCCTGAAC AAGCATTTCG GCGGGCTGCA CGTCACCAAC 
CAGGTGAACC TGTCGTTCGA GACGGGCGAG ATCCATTGCC TGATCGGCCC CAACGGGGCC
GGCAAGAGCA CGCTGTTCCG GCTGATCCTC GGCGAATACG CGCCCGGCTC GGGCGAGATT
TTCTTCGCCG GCGAGAACAT CACCGCGCTC AAGTCGTTCG CGCGGATCGC GCGCGGGCTT
TCGGTGAAGT TTCAGGTGCC TGGCGTGTTC AAGGGGCTGT CGGTGCGCCA GAACCTCGAG
ATCGCGCTGC AAAGGACGCG GCATGGCGCT GAGCTCGATC AGGAAATCGA CCGGTTGCTG
GCGTTCCTCG GCCTCGAAGC CGAGCAGAAG CAGACCGCGG GCAATCTCAG CCACGGCCAG
AAGCAGTGGC TGGAGATCGG CATGGCCACC AGCCTGAAGC CGCGGATGCT GCTGCTCGAC
GAGCCGACCG CGGGGATGTC ACCGGAAGAG ACGTTCCAGA CCGGCGAGAT GGTCAAGCGG
CTGAATGCCG GAGGCATGAC GGTGCTGGCG ATCGAACACG ACATGGCATT CGTCCGCCAG
GTCGCGCAGC GCGTCACCGT GCTGCATCTC GGTCAGGTGT TCGCACAGGG CTCGATCGAC
GACATCGTCG CCGACGAGCG GGTCGCGGCG ATCTATCTCG GACAGGCTCA TCACCATGCG
TAA
 
Protein sequence
MALLQLRGLN KHFGGLHVTN QVNLSFETGE IHCLIGPNGA GKSTLFRLIL GEYAPGSGEI 
FFAGENITAL KSFARIARGL SVKFQVPGVF KGLSVRQNLE IALQRTRHGA ELDQEIDRLL
AFLGLEAEQK QTAGNLSHGQ KQWLEIGMAT SLKPRMLLLD EPTAGMSPEE TFQTGEMVKR
LNAGGMTVLA IEHDMAFVRQ VAQRVTVLHL GQVFAQGSID DIVADERVAA IYLGQAHHHA