Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2666 |
Symbol | |
ID | 6410329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2896193 |
End bp | 2896915 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712542 |
Product | ABC transporter related |
Protein accession | YP_001991651 |
Protein GI | 192291046 |
COG category | [R] General function prediction only |
COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.297517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTGC TGCAACTCCG CGGCCTGAAC AAGCATTTCG GCGGGCTGCA CGTCACCAAC CAGGTGAACC TGTCGTTCGA GACGGGCGAG ATCCATTGCC TGATCGGCCC CAACGGGGCC GGCAAGAGCA CGCTGTTCCG GCTGATCCTC GGCGAATACG CGCCCGGCTC GGGCGAGATT TTCTTCGCCG GCGAGAACAT CACCGCGCTC AAGTCGTTCG CGCGGATCGC GCGCGGGCTT TCGGTGAAGT TTCAGGTGCC TGGCGTGTTC AAGGGGCTGT CGGTGCGCCA GAACCTCGAG ATCGCGCTGC AAAGGACGCG GCATGGCGCT GAGCTCGATC AGGAAATCGA CCGGTTGCTG GCGTTCCTCG GCCTCGAAGC CGAGCAGAAG CAGACCGCGG GCAATCTCAG CCACGGCCAG AAGCAGTGGC TGGAGATCGG CATGGCCACC AGCCTGAAGC CGCGGATGCT GCTGCTCGAC GAGCCGACCG CGGGGATGTC ACCGGAAGAG ACGTTCCAGA CCGGCGAGAT GGTCAAGCGG CTGAATGCCG GAGGCATGAC GGTGCTGGCG ATCGAACACG ACATGGCATT CGTCCGCCAG GTCGCGCAGC GCGTCACCGT GCTGCATCTC GGTCAGGTGT TCGCACAGGG CTCGATCGAC GACATCGTCG CCGACGAGCG GGTCGCGGCG ATCTATCTCG GACAGGCTCA TCACCATGCG TAA
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Protein sequence | MALLQLRGLN KHFGGLHVTN QVNLSFETGE IHCLIGPNGA GKSTLFRLIL GEYAPGSGEI FFAGENITAL KSFARIARGL SVKFQVPGVF KGLSVRQNLE IALQRTRHGA ELDQEIDRLL AFLGLEAEQK QTAGNLSHGQ KQWLEIGMAT SLKPRMLLLD EPTAGMSPEE TFQTGEMVKR LNAGGMTVLA IEHDMAFVRQ VAQRVTVLHL GQVFAQGSID DIVADERVAA IYLGQAHHHA
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