| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2663 |
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| Symbol | |
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| ID | 6410326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2892888 |
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| End bp | 2894126 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642712539 |
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| Product | putative UreA/short-chain amide transport system substrate-binding protein precursor |
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| Protein accession | YP_001991648 |
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| Protein GI | 192291043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03669] urea ABC transporter, substrate-binding protein, archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0749447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGAA CTGTATTACG GGGACTGCAT GCCGCAGTCC TCACGGGGAC GCTTGTCCTC
GCGTCAGGCG CGGCGCTGGC CGCGGAGAAG CCGATCAAGC TCGGCGTGCT GGAGGATCAG
TCGGGCGATT TCGCGGTGGC GACGATCGGC AAGGTCCACG CCATCCAGCT TGCCGCCGAC
GAGATCAACA AGGCCGGCGG CATCATGGGG CGGCCGCTCG AACTGGTGGT GTACGACACC
CAGTCCGACA ACACCCGCTA TCAGGAGTTC ATGCGCCGGG TGCTGCAGCG GGACAAGGCC
GATGCGGTGT TCGCCGGATT CTCCTCGGCC TCGCGCGAAG CCTATCGGCC GATCGTCGAT
CAGCTCAACG GTCTCGCCTT CTACAACAAC CAGTATGAAG GCGGTGTCTG CGACGGTCAT
ATGATCGTCA CCGGCGCGGT GCCCGAGCAG CAGTTCTCGA CGCTGATCCC GTGGATGATG
GAGAAGTACG GCAAGAAGGT TTACACGCTC GCCGCCGACT ACAATTTCGG CCAGATCTCG
GCCGAGTGGG TGCGCAACAT CGTCAAGCAG CATGGCGGCG AAATGGCCGG CGAGGAGTTC
ATCCCGCTCG GCGTGTCGCA GTTCTCGCAA AGCATCCAGA ACATCCAGAA GGCCAAGCCG
GACTTCGTGG TGACGCTGCT GGTCGGCACC GCGCAGGCTT CGTATTACGA GCAGGCCGCT
TCCGCCAACG TCAATCTCCC GATGGCGTCC TCGGTCAACG TCGGCCAGGG CTACGAGCAC
AAGCGCTTCA AGCCGCCGAG CCTGAAGGAC ATGTACGTCA CCACCAACTA CATCGAGGAA
ATCGACTCGC CGCAGAGCAA GGCGTTCCTG GCCAAGTTCA AGGCCAAGTT CCCGAACGAG
CCTTATGTCA ATCAGGAGGC CGAGAACTCC TATCTGGCGG TCTATCTCTA CAAGCAGATG
GTGGAGCGGG CGAAGTCGAC CAACCGCGAC GAGATCCGCA AGGTGATCGC GCAGGGCGAC
GTCTGCATGG ATGCGCCGGA AGGCAAGGTC TGCATCGACC CGAAGAGCCA GCACATGTCG
CACACCATCT ACCTGGCGCA CGTCAATGCC GATCACTCGA TCGACTTCCC GAAAGTCTGG
CCCGACATCA AGCCGTATTG GCTGGGTGAG GCCGGCTGCG ACCTGACCAA GAAGGATCCG
ATGGCGCAAT ACACGCCGTC GAACCCGCCG CCCAAGTAA
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| Protein sequence | MTGTVLRGLH AAVLTGTLVL ASGAALAAEK PIKLGVLEDQ SGDFAVATIG KVHAIQLAAD
EINKAGGIMG RPLELVVYDT QSDNTRYQEF MRRVLQRDKA DAVFAGFSSA SREAYRPIVD
QLNGLAFYNN QYEGGVCDGH MIVTGAVPEQ QFSTLIPWMM EKYGKKVYTL AADYNFGQIS
AEWVRNIVKQ HGGEMAGEEF IPLGVSQFSQ SIQNIQKAKP DFVVTLLVGT AQASYYEQAA
SANVNLPMAS SVNVGQGYEH KRFKPPSLKD MYVTTNYIEE IDSPQSKAFL AKFKAKFPNE
PYVNQEAENS YLAVYLYKQM VERAKSTNRD EIRKVIAQGD VCMDAPEGKV CIDPKSQHMS
HTIYLAHVNA DHSIDFPKVW PDIKPYWLGE AGCDLTKKDP MAQYTPSNPP PK
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