| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2661 |
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| Symbol | |
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| ID | 6410324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2891057 |
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| End bp | 2892214 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712537 |
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| Product | putative aliphatic amidase expression-regulating protein, AmiC |
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| Protein accession | YP_001991646 |
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| Protein GI | 192291041 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.547475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGC GGCTGCGCAT CGGTGTGATG TTTTCGACGA CCGGCTCCTA CGGGGCGGTC
GGACGCACCA TGCTCAACGG CGTGATGCTC GGCCTCAGCG AAGTGGCAGC CAGCGGAAGC
GGACCGGAGA TCGAGCCGGT CATCGTCAAT CCTGGCGGCG ACCTGTCGCA GTATCGCGCG
CTGGCACACG ACCTGCTGGC CTCCGGCGTC CGGCAGGTGG TCGGCTGTTA CACCTCGTCA
AGCCGCAAAG AGGTGATTCC GTGCTTCGAA AAGCACGATG GCCTGTTGTG GTATCCGTCG
CATTATGAGG GCTTCGAGAG CTCCGACAAT GTCATCTACA CCGGCGCCTC GCCGAACCAG
CACGTGCTGC CGCTGGTCGA TTATCTCGCC GCCAAGCACG GCAAGCGCGC GTTCTGCATC
GGCTCGAACT ATATCTGGGC GTGGGAGAAC AACCGGATCT TCCGCGAAGC GTTGATAGCG
CGCGGCGGCA CGGTGCTGGC CGAGCGCTAT CTTCCGGTCG GGGACACCGA TGTCGATCGA
GTCATCGCGG CGATCCTGGA GCAGCGTCCG AATTTTGTTT TCAACAATCT GATCGGCACG
AGCGCCTATG CGTTCTTCCG CGCGTTTCGT GCCGCGTGCC TCTCGCGCGG CATCGACCAG
GCTGCCGAGA TCCCGGTGGC GAGCTGCACG CTTGCCGAGC CGGAGCTGGC TGAGATCGGC
GCCGAGGCTG TCGACGGACA TCTGTCGTCG AGCGTGTATT TTGCTTCGCT GGCAGGGGCG
GCCAATGACG CGTTCACCCA AGCTTATGAG ACGAAATTTC CGGACGCGCC GCCGACCTCG
GCGGATGCGG AGGCCTGCTA CATCGCGGTC AAGCTGCTCG CCGCCGCTCT GCAACAGGCC
GGCACCGATG AGGCCGGCGC GGTGCGCGCG GCGGTCGCCG ATCAGCGCCT GATCGCTCCC
CAGGGCGAAG TGCGGATCGA TCCGCAGACC TATCACGCCT GGCTGACGCC GCGCATCGGT
CGGTCGACCG CGGCGGGTCA ATTCGAAGTG CTGCTCGAAG CGCCGGAGCC GATCGCGCCT
GATCCGTATC TGGTGCAAAC CTCGCCGCGG TTTGCCGCCG CCATGCGTTC TCCATTGTTG
AGGCTGGTGA AGTCATGA
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| Protein sequence | MTKRLRIGVM FSTTGSYGAV GRTMLNGVML GLSEVAASGS GPEIEPVIVN PGGDLSQYRA
LAHDLLASGV RQVVGCYTSS SRKEVIPCFE KHDGLLWYPS HYEGFESSDN VIYTGASPNQ
HVLPLVDYLA AKHGKRAFCI GSNYIWAWEN NRIFREALIA RGGTVLAERY LPVGDTDVDR
VIAAILEQRP NFVFNNLIGT SAYAFFRAFR AACLSRGIDQ AAEIPVASCT LAEPELAEIG
AEAVDGHLSS SVYFASLAGA ANDAFTQAYE TKFPDAPPTS ADAEACYIAV KLLAAALQQA
GTDEAGAVRA AVADQRLIAP QGEVRIDPQT YHAWLTPRIG RSTAAGQFEV LLEAPEPIAP
DPYLVQTSPR FAAAMRSPLL RLVKS
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