| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2652 |
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| Symbol | cobN |
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| ID | 6410314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2879871 |
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| End bp | 2883773 |
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| Gene Length | 3903 bp |
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| Protein Length | 1300 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712528 |
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| Product | cobaltochelatase subunit CobN |
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| Protein accession | YP_001991638 |
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| Protein GI | 192291033 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATTG CCCTCAACCT ACGCAGCGCG CTGATTGCGC TGCTGCTCGT TTTCGTTCCG
TTGGTCGATG GTGCACGGGC TGTTGACGAT CAGCCGCGCG TGCGGATCAT CGCCACCGAT
TTCGTCCTGA AAGGCAAGCT CGACCGGATC GCCAATATCG CTCAGCGTCA GGGCGTCACG
CTCGATCATG TCTATGTCGA CGCGCCTGGC GATCCAAAAG CGTGGATCTC CGGCGTCGAT
CTGGTCATCC TCGACACGCC GCGCCCCGGG GATGCGGCAA AAGTGCAGGA GCGCGTCGGT
GCCGACCTGG CCGCGTCGGA TCGACCATGG TTGCGGGTGG GCGGCGGACA GCCGGCCTTT
GCCAATATGT CGCCGCCGCA AGCCCGTCGG CTGTCTGGCT ATTACGCGGG CGGCGGTGAG
GCTAATCTCA CGGCCATGTT CGCCTATCTG GCCGCATCGA AGGCTGGTAC CGACACGTCG
ACCATTGCTG CGCCTGTGCC CCTTGCGAGC AGGGGATTTT ATCATCCGTC TGCTCCGCAT
CCGTTCGCCG ACATCGATGC CTATCTGGCA TGGGGCGCGC AGCGCTGGAA GCCCGGCGCA
CCCAGAGTCG CGTTCATCAT TCATCCTGGC CTGTTGGCCG GCTTCGAGAC CGCTGCGATC
GACATGATGA TCACGCGTGC CGAAGCAGCC GGGCTGTTGC CCGTGGCGCT TTGGTTCGAG
GCGCGCGAAC CCGAAGCGCT GCAGCAAATG CTGGGGCCAG GCAAGGCCGA CGTGATCGTG
ATCGCGACAC ATCTCCAGAA CGGCGGCGCA CGCAGCGTCG AGTTTCGTAA ACTCGACGTG
CCGGTGCTGC AGGCGATCAG TTCCCGTGCC GGCTCGCCGG AGCAATGGGC GGCCGCGCAG
AGCGGCATCG CGCAGCAATT GGTTGCGCCA TTCCTGGCCG TGCCGGAGAG CTTGGGCGTC
AGCGATGCCA TCGTCACCGA CGCGTTGGAG GACGGGCGGC CGACGCCGAT GCCTGAGCAG
GTCGAGGCCT TGATCGCCAA GGCACGACGG CTCGCCGTGC TGCGCCACAA GGCGGCTGCC
GAGAAAAAGC TCGCCCTGAT GTTCTGGAAT TATCCACCGG GGGATAAGAA TTTCTCCGCA
TCAAACTTGA ACGTGCCGCG TAGCGTGCAG CGGTTGACCT CCGCGCTTGC GGAGGCTGGC
TACGCCGTGC CGCCGCTTGG AGAGAACCAG CTCATCGAGA TTGGCCAGGC CTTGCTCGTC
GGCATCTATC ATCCGGAAAC GCTTCCAGAG TTGCACAAGC GGGGCTACGC CGCGACGTTC
CCGGTGCGGA CCTATCGGGC TTGGCTGGAT CGGCTACCGG CCGCGCGCCG CGACGAGCTT
ATTGCGCGCT GGGGACAGCC GGAAGCGGCG CCGACGGTGT TCGAGATCGA CGGGGAAAGG
CAGTTTGTGG TTCCGCGCTA TGAGGTTGGT CATCTTGCCT TGATGCCGCA ACCGCAGCGT
GGCGGAAGTG GCGGCTCGAA CTATCACGAC ACCAAGGAGC CTCCATCGCA TGCTTACCTC
GCTGCTTATC TGTTGCTGGC AGATCGTGGT GCGGACGCGT TGATCCATTT CGGGACCCAC
GGTACGCAGG AATGGACGCC GGGTAAGGAC CGCGGTCTTG CGGTCACCGA CTACCCATTT
CTAACGGTCG GCGATCTGCC TGTGCTTTAT CCTTACATCC AGGACAACAT CGCCGAAGCC
GTCCAGGCGA AGCGGCGCGG ACGAGCTGTC ATCGTCAGCC ACCAGACGCC GCCCTTCGCG
CCGGCGGGGC TCTACGACGA GTTGCGGGAT CTGCATGCGA AGATCCACGA ATATATCCAG
CTCGACGACG GCAGCGTGCG CGATCAGACC GCCGCCGAGA TCCGAGCCAT CGTGATCAAG
AGCAACATCA ATCGCGACAT GAGCTGGGAC GAGCAACGCA TGGCCAGCGA TTTCCCGGGC
TTTCTCTCGG CGCTGCATGA TCACATCCAC GAACTGGGCC GGCAATCCAT GCCGCTGGGC
CTGCACACAT TCGGCGAACC GGCCACCAGT GATAACCGCA TTGCCACGGT CATGCAGCAA
CTCGGAGAGC CGTTCTATCG TCAGGTGGGC AGCCAGCCCG ACGAGTTGTT CGCGGCGGAC
TTTCCGTCGC TTCAGGCGAT CGCTCCCTAC CGGATACTAC ACGACGTGTT TGCGAGCGGT
GGGACGGTTC CGAGCGATGC CGCACCGGAG CTGAAGGTGA TGCTCGAGCG TGCGATCGTG
CTGGACCGGC GTCTGACCGA TACGCAGGAG ATGGAAGCGC TGCTGGCAGG TTTGGCGGGC
CGTTTCGTGC AGCCGGGCGC CGGCGGCGAT CCAATCCGCA ATCCCGACGT GCCAAGCGGC
CGCAACATCT ATCCTTTCGA GTCCGACAAG GTGCCGACAC GTGCGGCTTA TGATGCCGGC
GGTGCAGCTC TGAGCCAATT GCTGGACGCA TATCGCACCG AGCATGCCGA CGCGATGCCG
CAGAAGCTCG CTTTCAGCCT GTGGGGCTCG GAAACGATGC GGCATCTCGG GATTCAGGAA
AGCCAGATTC TCCATGCGCT CGGCTTAAGG CCGGTCTGGG ACGGAGGGGG GCGCCTCGTC
CGCCTCGACA TCATCCCGCG CGCCGAACTC GGACGTGCAC GGATCGACAC CGTTATCCAG
GTGACGAGCG TCTACCGCGA TCAGTTCGAT AGCTTCATGC GGATGCTGGC GGATGCCATC
GAACGCGTGG CCGCGTTGGA TGAGCCCGAC AATGCAGTCG CGTCTAATGC GCGGGCGTTG
GAAGCCAGGT TGATCGGGCG CAATCAGGAT GCGGCGACGG CTCGCCGTCT CGCTTCGCTG
CGCATGTTCA GCAACGCTGT CGGTGATTAT GGTACGAGCC TGCCCGGCAG CGTGCTCAAG
TCGGCGTCGT GGGACAACGA GGCGTCGCTG GCGGACGCCT ATCTTGATCG TCTGCAATAT
GCCTATGGCA GTGGTGATTG GGGCGTCAGC ATCGGCGGAA CCAATCTGTT TGCCGAGCAA
CTGAAGGGCG TGCAGGCGGC CGTGCTGTCG CGCTCGTCCA AGCTTCACGG TCTGCTGTCC
ACCGACCATC CATTCGAATA TCTCGGCGGG CTGTCGCTGG CGATCCGGCA TCTAAGCAGT
GCATCGCCGT CGCTCTACGT CACCGATCTG CGCGAGCAGA CCTCGCGGGT CGGCTCGGTA
GCGCGTTTCC TGGCGGACGA GATGCGCTCC CGCTATCTCA ATCCTCATTG GATCGCCGGC
ATGCAGAAGG AGGGATACGC CGGAACGCTG GAGATCCTGA ACGCCGTCAA CAATCTATGG
GGATGGCAGG TGACCGATCC GACATCCGTC CGAGCGGATC AGTGGCAGGC AGTGCATGAC
ACGTTTGTGC TTGATAAGCA CGAACTCGGG CTGGCGGCGT GGTTCAAGCT GAGCAATCCG
GCGGCAGAAG CCCAGATGAT CGAGCGTATG GTCGAGGCCG TTCGCAAGGG CTACTGGAAG
GCCTCCGAAC AGACCAAGCG CGAGCTCGTC GAGCGTCTCC GCGAGATCGA GGACGGGCCG
AACAGTCAAA TCACCGCTGC GGCGACGCGA GCCTTCATTG CCAAACTCCG GGCCGGTTTT
GATCTGTCTG CGATCGCGCA GCCGGCGTCG GAGCCGGCGT CCGCTCCAGC TCCCGTCAGC
GAGGCCGGCG GCGAATCCGT CCAGGGAGTT GTGATGCAGC AGGTCCAGGC GTCTCCAGGA
GGAGACCGAC CAAAATGGCA GCTATGGGCG GGCCTGGCCT CGCTCCTTGT GTGCTTTGTG
ATCGGCGTCT TCATGCAGGG CCGGTCCGAC GTGAGACTGC GCGAAGAAAG GCTATCGACG
TGA
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| Protein sequence | MQIALNLRSA LIALLLVFVP LVDGARAVDD QPRVRIIATD FVLKGKLDRI ANIAQRQGVT
LDHVYVDAPG DPKAWISGVD LVILDTPRPG DAAKVQERVG ADLAASDRPW LRVGGGQPAF
ANMSPPQARR LSGYYAGGGE ANLTAMFAYL AASKAGTDTS TIAAPVPLAS RGFYHPSAPH
PFADIDAYLA WGAQRWKPGA PRVAFIIHPG LLAGFETAAI DMMITRAEAA GLLPVALWFE
AREPEALQQM LGPGKADVIV IATHLQNGGA RSVEFRKLDV PVLQAISSRA GSPEQWAAAQ
SGIAQQLVAP FLAVPESLGV SDAIVTDALE DGRPTPMPEQ VEALIAKARR LAVLRHKAAA
EKKLALMFWN YPPGDKNFSA SNLNVPRSVQ RLTSALAEAG YAVPPLGENQ LIEIGQALLV
GIYHPETLPE LHKRGYAATF PVRTYRAWLD RLPAARRDEL IARWGQPEAA PTVFEIDGER
QFVVPRYEVG HLALMPQPQR GGSGGSNYHD TKEPPSHAYL AAYLLLADRG ADALIHFGTH
GTQEWTPGKD RGLAVTDYPF LTVGDLPVLY PYIQDNIAEA VQAKRRGRAV IVSHQTPPFA
PAGLYDELRD LHAKIHEYIQ LDDGSVRDQT AAEIRAIVIK SNINRDMSWD EQRMASDFPG
FLSALHDHIH ELGRQSMPLG LHTFGEPATS DNRIATVMQQ LGEPFYRQVG SQPDELFAAD
FPSLQAIAPY RILHDVFASG GTVPSDAAPE LKVMLERAIV LDRRLTDTQE MEALLAGLAG
RFVQPGAGGD PIRNPDVPSG RNIYPFESDK VPTRAAYDAG GAALSQLLDA YRTEHADAMP
QKLAFSLWGS ETMRHLGIQE SQILHALGLR PVWDGGGRLV RLDIIPRAEL GRARIDTVIQ
VTSVYRDQFD SFMRMLADAI ERVAALDEPD NAVASNARAL EARLIGRNQD AATARRLASL
RMFSNAVGDY GTSLPGSVLK SASWDNEASL ADAYLDRLQY AYGSGDWGVS IGGTNLFAEQ
LKGVQAAVLS RSSKLHGLLS TDHPFEYLGG LSLAIRHLSS ASPSLYVTDL REQTSRVGSV
ARFLADEMRS RYLNPHWIAG MQKEGYAGTL EILNAVNNLW GWQVTDPTSV RADQWQAVHD
TFVLDKHELG LAAWFKLSNP AAEAQMIERM VEAVRKGYWK ASEQTKRELV ERLREIEDGP
NSQITAAATR AFIAKLRAGF DLSAIAQPAS EPASAPAPVS EAGGESVQGV VMQQVQASPG
GDRPKWQLWA GLASLLVCFV IGVFMQGRSD VRLREERLST
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