| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2639 |
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| Symbol | |
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| ID | 6410301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2860532 |
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| End bp | 2863456 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712515 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001991625 |
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| Protein GI | 192291020 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.618386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTCG GAACCGAAGC TGCTCACGCC GCGCGCCGCG CGCCATTGTC ACCCCTCGCC
TCTGCCGACG TCGTAGCCGG CGCCGCGCAC GAGACGAGCT ATCAGGTGAT CCGGCGGAGC
GGCGAGGTGT CGCCGTTCGA CGCATCGAAA ATCGCCGTTG CGCTGACGAA AGCGTTCCTC
GCCGTCGAAG GCAGCAACGC CGCCGCGTCC CGGCGCGTTC ACGACACCGT TGCCGAACTG
ACCGACCAGA TCGTCGCCAA CCTCACCCGC CGGGTCGGCC CGGGCCGCAC CTTCCACATC
GAGGATATCC AGGATCAGGC CGAACTGGCC CTGATGCGCA GCGAGCACCA CAAGGTCGCG
CGCGCCTACG TGATCTATCG CGAAGAGCGC ACCCGTGAAC GCGCCAAGGC GGCGGCCGCG
CAGGTCAAAC CCGTCGCCCC CGCGCTGCGC ACCAAATCCG CCGACGGCAC GTTGCATCTG
ATCGACATGC AGCGCCTCGC CGCCATCATC GCGGAAGCGT GCGCGGGGCT CGACGGGGTT
TCGGTCGACG CCGTGCTCGC CGAAACGCAG CGCAATCTCT ACGACGGGAT CAGCGACGAC
GAACTGGCGC TGGCGCCGAT TCTCGCCGCG CGAATCTTCG TCGAGACCGA GCCCGACTAC
GCCAAGGTCA GCGCACGGCT GCTGCTCGAC AAGCTCCGCC GCGAAGCCCT GAGCTTCGTC
GAGGGCCGGC CGCATCAGGC GACACAGGCA CAGATGGCGG AACGCTATGC CGACTATTTT
AGCGCCTATG TCAAAGCCGG CATCGCGCAC GAACTGATCG ATCCGGAAAT CGGACGTTTC
GATGTTTCCA AACTCGCCGC CGCGATCAAA CCAGAGCGCG ACCTGCAGTT CGACTATCTC
GGCCTGCAGA CCCTGTACGA CCGTTACTTC CTTCATGTCC ATGGCACGCG CTTTGAACTA
CCTCAGGCCT TCTTCATGCG TGTGGCCTGC GGCATCGCAC TGCGCGAGGT CGATCGCGAG
GCCAAGGCAA TCGAATTCTA CGACCTGCTG TCGTCGTTCG ACTTCATGGC GTCGACTCCG
ACCTTGTTCA ACGCCGGAAC GCTGCGGCCG CAATTGTCGT CATGCTTCCT CACTACGGTG
CCCGACGATC TCGACGGCAT TTTCAAATCG ATCAAGGACA ACGCGCTGCT GTCGAAGTAC
GCTGGCGGGC TCGGCAACGA CTGGACGCAC GTCCGCGGCC TCGGCGCGCA TATCAAGGGC
ACCAACGGCG AGAGCCAGGG CATCGTGCCG TTCCTGAAAG TCGCCAACGA CACCGCGATC
GCGGTCAATC AGGGGGGCAA GCGCAAGGGC GCGGTCTGCG CCTATCTCGA GACCTGGCAC
ATCGACATCG AAGAATTCCT CGACCTGCGC AAGAACACCG GCGACGACCG CCGCCGCACC
CACGACATGA ACACCGCCAA CTGGGTGCCG GACCTGTTCA TGCAACGCGT CGAGCAGAAC
GGCCCGTGGA CACTGTTCTC GCCGGATGAG ACGCCGGATC TGCACGACCT GACCGGCCGG
GCCTTCGCCG AGCGCTACGC GTTTTATGAA GCCAGGGCGG CGCGCGGAGA ACTGCGCGTC
ACCAAACAGA TCCGCGCGGT CGACCTGTGG CGGCGGATGC TGACGATGCT GTTCGAGACC
GGGCATCCGT GGATCACCTT CAAGGACCCC TGCAACCTGC GCTCGCCGCA GCAGCATTGC
GGCGTGGTGC ATTCCTCCAA TCTCTGCACC GAGATCACCC TGAACACGTC AGAGCGCGAG
GTCGCGGTGT GCAATCTCGG CTCGGTCAAC CTCGTCAATC ATGTTGTGGA CGGACGGCTC
GACTGCGCCC GTCTGGAGCG GACCGTGACG ACGGCGATGC GGATGCTCGA CAACGTCATC
GACGTCAATT TCTACACCAT CCCAGAGGCG CGCGCGTCCA ATCTCCGGCA TCGCCCGGTA
GGTCTCGGCC TGATGGGCTT CCAGGATGCG CTCAACATTC TGCGCCTGCC TTACGCATCC
GATGAGGCCG TCGCCTTCGC CGACGAGAGC ATGGAGGCGA TCGCCTATTG GTCGATCTCG
GCCTCTGTCG ATCTCGCCGC CGAGCGCGGG CGCTACGCCT CCTACGACGG CTCGCTGTGG
TCGCAAGGCA TTCTGCCGCT GGATTCGATC GATCTCCTCG ACGAGGCACG CGGCGCTGCG
ATCGAGGTCG ACCGCGGCAG CCGGCTCGAC TGGGAGGCCC TGCGCAAGCG CGTCACGGCG
ACCGGCATGC GCAACTCCAA CGTCATGGCG ATCGCGCCGA CCGCGACGAT CTCCAATATC
TGCGGCGTGT CGCAGTCGAT CGAGCCCGCC TATCAGAACC TCTACGTCAA GTCGAACATG
TCGGGCGATT TCACCGTCGT GAACACCCAT CTGGTGCGCG ACCTGAAAGG CCGCGGCCTG
TGGGACGAGG TGATGATCTC CGATCTGAAA TATTTCGACG GCAGTCTCGG CCAGATCGAC
CGCGTCCCCG ACGATCTCAA GGCGCTGTAC GCGACCGCTT TCGAGATCGA CGCGACATGG
CTGATCGAGG CCGCTGCCCG GCGCCAGAAA TGGATCGACC AGGCCCAGTC GCTCAACCTG
TACCTCGCCA ACCCGAGCGG CAAGACGCTC GACGCACTGT ATCGGCTGGC GTGGCGGCGG
GGCTTGAAAA CCACCTACTA CCTACGATCG CGCTCGGCCA CTCACGTCGA GAAGTCGACG
CTGCGCGGCA CCGACGGCAA GCTCAACGCG GTCTCCGCGA TCATCCTGCC GACCGCCTCC
GCCGAACCGT CGCGGAGCAA CGGAGCCGGG AACGGCCACG CAGCCACCGA AGGCTGGGGC
AAGGCTTGCG CCATCGACGA TCCGGGTTGC GAGGCGTGCC AGTGA
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| Protein sequence | MSVGTEAAHA ARRAPLSPLA SADVVAGAAH ETSYQVIRRS GEVSPFDASK IAVALTKAFL
AVEGSNAAAS RRVHDTVAEL TDQIVANLTR RVGPGRTFHI EDIQDQAELA LMRSEHHKVA
RAYVIYREER TRERAKAAAA QVKPVAPALR TKSADGTLHL IDMQRLAAII AEACAGLDGV
SVDAVLAETQ RNLYDGISDD ELALAPILAA RIFVETEPDY AKVSARLLLD KLRREALSFV
EGRPHQATQA QMAERYADYF SAYVKAGIAH ELIDPEIGRF DVSKLAAAIK PERDLQFDYL
GLQTLYDRYF LHVHGTRFEL PQAFFMRVAC GIALREVDRE AKAIEFYDLL SSFDFMASTP
TLFNAGTLRP QLSSCFLTTV PDDLDGIFKS IKDNALLSKY AGGLGNDWTH VRGLGAHIKG
TNGESQGIVP FLKVANDTAI AVNQGGKRKG AVCAYLETWH IDIEEFLDLR KNTGDDRRRT
HDMNTANWVP DLFMQRVEQN GPWTLFSPDE TPDLHDLTGR AFAERYAFYE ARAARGELRV
TKQIRAVDLW RRMLTMLFET GHPWITFKDP CNLRSPQQHC GVVHSSNLCT EITLNTSERE
VAVCNLGSVN LVNHVVDGRL DCARLERTVT TAMRMLDNVI DVNFYTIPEA RASNLRHRPV
GLGLMGFQDA LNILRLPYAS DEAVAFADES MEAIAYWSIS ASVDLAAERG RYASYDGSLW
SQGILPLDSI DLLDEARGAA IEVDRGSRLD WEALRKRVTA TGMRNSNVMA IAPTATISNI
CGVSQSIEPA YQNLYVKSNM SGDFTVVNTH LVRDLKGRGL WDEVMISDLK YFDGSLGQID
RVPDDLKALY ATAFEIDATW LIEAAARRQK WIDQAQSLNL YLANPSGKTL DALYRLAWRR
GLKTTYYLRS RSATHVEKST LRGTDGKLNA VSAIILPTAS AEPSRSNGAG NGHAATEGWG
KACAIDDPGC EACQ
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