| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2612 |
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| Symbol | |
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| ID | 6410274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2824640 |
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| End bp | 2825326 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642712490 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001991600 |
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| Protein GI | 192290995 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0412974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGAAC TCATCCTCAT CGCTGAAGAC GAGCCGGAGA TCGCCAAGAT TCTCGACGCC
TATCTGGTGC GGGAAGGATA CCGCACCGTG AATGCGGCCG ACGGGCAGAC GGCGCTCGAT
CAGCACGCGA TCCTGAAGCC GGATCTCGTT CTTCTCGATG TGAAGATGCC GAAAATCGAC
GGCTGGGACG TCCTCGCAGA GTTGCGTCGT CGGGGTGAGA CGCCGATCAT CATGATCACG
GCGCTCGACC AGGATCTCGA TCGTCTGCAG GGGCTCCGTC TTGGCGCGGA CGACTATGTA
GTCAAGCCCT TTAACCCGCT CGAAGTCGTC GCCCGCGCCA AAGCAGTGCT GCGACGGTCG
GGTTACGCCA ATAATCGAAC GCTTCTCCGC ATCGAAAACC TGGAGATCGA CCTTGAGAGC
CACCTCGCCA AGGTACATGG CGACGGCACC TCGATGTCAT TGCAACTCAC CCTGACGGAG
TTCCGACTTC TGGCTCACAT GGCAAAAGCG CCGACGCGGG CTTTCGGCAG ACACGAACTG
ATCGATGCCT GCCTACCGGG TGGGGACGCG CTAGAGCGGA CGGTCGACAG CCATGTCAGC
AATCTGCGCC GCAAGCTCGA CGAGGCGGGC GCGACCGGGA TGATGTCGGT CGTGCGCGGG
ATCGGCTACC GGCTAACGGC CGCATGA
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| Protein sequence | MNELILIAED EPEIAKILDA YLVREGYRTV NAADGQTALD QHAILKPDLV LLDVKMPKID
GWDVLAELRR RGETPIIMIT ALDQDLDRLQ GLRLGADDYV VKPFNPLEVV ARAKAVLRRS
GYANNRTLLR IENLEIDLES HLAKVHGDGT SMSLQLTLTE FRLLAHMAKA PTRAFGRHEL
IDACLPGGDA LERTVDSHVS NLRRKLDEAG ATGMMSVVRG IGYRLTAA
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