Gene Rpal_2609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2609 
Symbol 
ID6410271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2821768 
End bp2822868 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content67% 
IMG OID642712487 
ProductThreonine aldolase 
Protein accessionYP_001991597 
Protein GI192290992 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0270764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCTACG CCCCCGCCCC TGACGATCCG CGACTGCCGC CGGTGCGGAT CAATTTGCTG 
TCGGACACTC AGACGCAGCC CAGTGCGGCG ATGCGCGAGG CGATGGCGCG GGCGCCTGTG
GGAGACGAAC AGATCGGCGC CGATCCGACC GTGAACGCGC TGTGCGCCCG TGTCGCCGAT
CTGCTCGGCA AGGAGGCGGC GGTGTTCATG GCGTCCGGCA CGATCTGCAA CATTGCGGCG
ACGTTGGCGC ATTGCCGAGC CGGCGACGAA ATTCTCGCGC ACGAGACGTC CCATGTCGTC
TCGCTGGAGG GCTGCACACA CGCGGCTCTC GGTGGCTTTC AGATCCACCC GCTGCCGGGC
GCAGGCGGTC AGTTCTCCGC TGAAACGCTG CGATCGGCGC TGCATCGGCC AGACCGGCAT
CAGGCGAAGC AGAGCTTGGT GTGCGTCGAG CAGACCACCA ATCTCGGCGG CGGCACGGTG
TGGAACGCTT TGACGCTCCG GCAGATCGCG GAATTGGCTC GCGCCAATGG ATTAGCCACC
CATATGGACG GTGCTCGCCT GATGAACGCC AGCGTCGCCA GCGGCATCTC GGCCCGGCAG
ATCGCCGCCG GCTGGGACTC GGTGTGGATC GACTTCAGCA AGGGCCTCGG CGCGCCGCTC
GGTGCCGTGC TGGCGGGATC GCGCGATTTC ATCGACGAGG TCTGGCTGTG GAAGCAGCGG
CTCGGCGGGT CGCTGCGTCA GGCCGGCATT TGCGCCGCCG CCTGCCTGTA TGCGCTCGAC
CACAATGTCG GGCGACTTGC TGAGGATCAC GCCAATGCCC GACTGCTCGC GGCAGGCTTG
TCGCAGATCG ACGGCGTGAG CGCTGAACCG CCGGAGACCA ACCTGGTCTA TTTCGACGTC
TCCGGCGCCG CGTGGTCAAA GCAGGCATTG GTCGACGCGC TGCGCGCCCG TGGTGTGCTG
ATCTCGATCC TCAGCGGCCG GCTACGCGCC TGCGCGCATC TCGACGTCAC GCCCGCGATG
ATCCAAGAGG CGCTCGCAGT GATCCGCGAC GTGGTCGAAG GCGATACGAC GGCCCGGATC
GGCCGCAGCG CACAGATCTG A
 
Protein sequence
MIYAPAPDDP RLPPVRINLL SDTQTQPSAA MREAMARAPV GDEQIGADPT VNALCARVAD 
LLGKEAAVFM ASGTICNIAA TLAHCRAGDE ILAHETSHVV SLEGCTHAAL GGFQIHPLPG
AGGQFSAETL RSALHRPDRH QAKQSLVCVE QTTNLGGGTV WNALTLRQIA ELARANGLAT
HMDGARLMNA SVASGISARQ IAAGWDSVWI DFSKGLGAPL GAVLAGSRDF IDEVWLWKQR
LGGSLRQAGI CAAACLYALD HNVGRLAEDH ANARLLAAGL SQIDGVSAEP PETNLVYFDV
SGAAWSKQAL VDALRARGVL ISILSGRLRA CAHLDVTPAM IQEALAVIRD VVEGDTTARI
GRSAQI