Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2609 |
Symbol | |
ID | 6410271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2821768 |
End bp | 2822868 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642712487 |
Product | Threonine aldolase |
Protein accession | YP_001991597 |
Protein GI | 192290992 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0270764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCTACG CCCCCGCCCC TGACGATCCG CGACTGCCGC CGGTGCGGAT CAATTTGCTG TCGGACACTC AGACGCAGCC CAGTGCGGCG ATGCGCGAGG CGATGGCGCG GGCGCCTGTG GGAGACGAAC AGATCGGCGC CGATCCGACC GTGAACGCGC TGTGCGCCCG TGTCGCCGAT CTGCTCGGCA AGGAGGCGGC GGTGTTCATG GCGTCCGGCA CGATCTGCAA CATTGCGGCG ACGTTGGCGC ATTGCCGAGC CGGCGACGAA ATTCTCGCGC ACGAGACGTC CCATGTCGTC TCGCTGGAGG GCTGCACACA CGCGGCTCTC GGTGGCTTTC AGATCCACCC GCTGCCGGGC GCAGGCGGTC AGTTCTCCGC TGAAACGCTG CGATCGGCGC TGCATCGGCC AGACCGGCAT CAGGCGAAGC AGAGCTTGGT GTGCGTCGAG CAGACCACCA ATCTCGGCGG CGGCACGGTG TGGAACGCTT TGACGCTCCG GCAGATCGCG GAATTGGCTC GCGCCAATGG ATTAGCCACC CATATGGACG GTGCTCGCCT GATGAACGCC AGCGTCGCCA GCGGCATCTC GGCCCGGCAG ATCGCCGCCG GCTGGGACTC GGTGTGGATC GACTTCAGCA AGGGCCTCGG CGCGCCGCTC GGTGCCGTGC TGGCGGGATC GCGCGATTTC ATCGACGAGG TCTGGCTGTG GAAGCAGCGG CTCGGCGGGT CGCTGCGTCA GGCCGGCATT TGCGCCGCCG CCTGCCTGTA TGCGCTCGAC CACAATGTCG GGCGACTTGC TGAGGATCAC GCCAATGCCC GACTGCTCGC GGCAGGCTTG TCGCAGATCG ACGGCGTGAG CGCTGAACCG CCGGAGACCA ACCTGGTCTA TTTCGACGTC TCCGGCGCCG CGTGGTCAAA GCAGGCATTG GTCGACGCGC TGCGCGCCCG TGGTGTGCTG ATCTCGATCC TCAGCGGCCG GCTACGCGCC TGCGCGCATC TCGACGTCAC GCCCGCGATG ATCCAAGAGG CGCTCGCAGT GATCCGCGAC GTGGTCGAAG GCGATACGAC GGCCCGGATC GGCCGCAGCG CACAGATCTG A
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Protein sequence | MIYAPAPDDP RLPPVRINLL SDTQTQPSAA MREAMARAPV GDEQIGADPT VNALCARVAD LLGKEAAVFM ASGTICNIAA TLAHCRAGDE ILAHETSHVV SLEGCTHAAL GGFQIHPLPG AGGQFSAETL RSALHRPDRH QAKQSLVCVE QTTNLGGGTV WNALTLRQIA ELARANGLAT HMDGARLMNA SVASGISARQ IAAGWDSVWI DFSKGLGAPL GAVLAGSRDF IDEVWLWKQR LGGSLRQAGI CAAACLYALD HNVGRLAEDH ANARLLAAGL SQIDGVSAEP PETNLVYFDV SGAAWSKQAL VDALRARGVL ISILSGRLRA CAHLDVTPAM IQEALAVIRD VVEGDTTARI GRSAQI
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