Gene Rpal_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2602 
Symbol 
ID6410264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2813358 
End bp2814404 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content65% 
IMG OID642712480 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001991590 
Protein GI192290985 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCCT CGCCCTCGCA GCTTCCCGTC CTCGACCTCA GCCGGTTTCG CAGCGACACC 
GCTGAGCGCG CGGAATTTCT CCGCGATGTC CGCAACGCCG CATTCGGTCC TGGATTTTTC
TACCTTGTCG GACATGGCAT CTCGGACCGG CTGATCCGGG ACGTGCTGTT TGCCTCGCGT
AATTTCTTTG CGCTCCCTGA GGCGGACAAG CTCGATATCG AGATGATCAA CTCGCCGCAT
TTCCGCGGTT ACACCCGCGC CGGCCGGGAA TTCACCCGTG GCCAGCCGGA TTGGCGCGAA
CAGGTCGATG TCGGCGCCGA ACGCGAGGCG TTCCCCCTCA GCCGTTCGGC GCCACCCTGG
ACCAGGTTGC AGGGCCCGAA CCAATGGCCC GACGCGCTGC CGGAACTGAA GCCGCTGCTG
CTGCGCTATC AGCAGGAGGT GACGGAGCTA GCGATCAAAG TGCTGCGGGT GTTCGCCGCC
GCGCTCGGCC AGGCCGAGGA CGTGTTTGAA CCGATTTACG TGCCCTCGCC CAACCAGCTG
ATCAAGATCA TCCGCTATCC CGGCCGCGCA GCGGACGAGA GCGATCAGGG CGTCGGTGCA
CACAAGGATT CCGGCTTCGT CACCATCCTA CTGCAGGACA CCGTGGCCGG CTTGCAGGTC
GAAACTGCTG ACGGCTGGAT CGATGCACCG CCCCTCCCGG GCTCGTTCGT GGTCAATATC
GGCGAGATCC TCGAGCTGGC GTCGAACGGC GCGCTGCGCG CCAATGTGCA CAGGGTGGTG
TCACCGCCGC CGGACACCGA CCGGCTGTCG GTTGCGTTCT TCCTTGGCGC GCGGCTTGAC
GCCACCGTGC CGGTGCTGAC GCTGCCGCCG GAGCTCGCCG ATTACGCCCG CGGCGTCACG
CAGGATCCGC AGAACCCGTT GTTCCGCGAC GTCGGACGCA ACTATCTCAA GGGCCGGCTG
CGTTCACACC CGGACGTGGC CGAGCGTCAC CATGCTGATC TGTTGGACGA ATATTCCATC
AAGCCGGGCC TCGCGGCGGC GTATTAG
 
Protein sequence
MTASPSQLPV LDLSRFRSDT AERAEFLRDV RNAAFGPGFF YLVGHGISDR LIRDVLFASR 
NFFALPEADK LDIEMINSPH FRGYTRAGRE FTRGQPDWRE QVDVGAEREA FPLSRSAPPW
TRLQGPNQWP DALPELKPLL LRYQQEVTEL AIKVLRVFAA ALGQAEDVFE PIYVPSPNQL
IKIIRYPGRA ADESDQGVGA HKDSGFVTIL LQDTVAGLQV ETADGWIDAP PLPGSFVVNI
GEILELASNG ALRANVHRVV SPPPDTDRLS VAFFLGARLD ATVPVLTLPP ELADYARGVT
QDPQNPLFRD VGRNYLKGRL RSHPDVAERH HADLLDEYSI KPGLAAAY