Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2574 |
Symbol | |
ID | 6410236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2781879 |
End bp | 2783537 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642712452 |
Product | ABC transporter related |
Protein accession | YP_001991562 |
Protein GI | 192290957 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACG ATATCCTGCT GTCCGTCGAG AATCTGTCGG TCGAGCTGCC GCATGGCGGC GATCGCAGCC ACGCCGTTTC GGATGTCTCG CTGAGCGTCC GCCGCAACGA GATCGTCTGT CTGGTCGGCG AGTCCGGCTC CGGCAAGTCG ATCACCGCGC ATGCGGTGCT GCGGCTGCTG CCGCCGAGCC TGGAGATCGG CACCGGCGCA GTTCGGTTTC GCGGCGAGGA TCTCGCCCAT GCGGATGAGG GCACGATGCG CCGTCTGCGC GGCGGCGCGA TCTCGATGAT CTTTCAGGAG CCGCTCAGCG CGCTCAATCC GCTGGCGCGG GTCGGTCATC AGATTGCAGA GGCGATCCTG GTTCATGCCG CGCCGCGGCC GAGCCGCGCC GAGCTCGATG CGCGGGTGTT GGAGCTGATC GCCGCGGTCG GCTTGCCGGA CCCCGCCACC CTGGTGCGCA GCTATCCGTT CCAGCTCTCC GGCGGCCAGC GCCAGCGGGT GATGATCGCG ATGGCGATGG CCAACAATCC GGCGCTGCTG CTTGCCGATG AGCCGACTAC CGCGCTCGAC GTCACCACGC AGAAGCAGAT CCTGGCGCTG ATCCGGCGGC TGCAGGCCGA GCGCGGGATG GGGGTGTTGT TCATCACCCA TGACTTTGGC GTGGTCGCCG ATATCGCGGA CCGCGTCGTG GTGATGCGCA ACGGCCGCGT GGTCGAGCAG GGCACTGTCG ACGAGGTGCT GCGGCGGCCG AAGGACGACT ACACCAAGGC GCTGATCGCC GCGGTGCCGG GTTCGCGTCC GTCCGCATCC GGCGATCGCG GGATTGAGGG CGAGCCGCTG CTCGACGCGC ATGGGCTGAA CAAGACCTTC GTGACCGGGC AGGGAATGTT CCGGCCGGAT CGGACGGTGG TTGCGGTGCG CGACGTCGCG CTCAGTCTGC GGCCGCGCGA GACGGTCGCG GTGGTGGGCG AGTCCGGCTC CGGCAAATCG ACGCTGGGCC GCATCATCAT GCGCCTGATC GAGCCCGATA CCGGCGCGAT CGAATTCGCC GGCGCGGATT TCCTCCAACT CCGCGGCGAA CAGCTCCGGG CGATGCGCCG CAAGGTGCAG ATCGTGTTTC AGGATCCATT TGCGGCGCTC GATCCCCGCC AGAAGGTCGG CGATGCGATC GCACGCGGCC CGATGGCCTA TGGTGTGCCG CCGGCTGAGG CAATGGCCGA CGCCAAGCGT CTGCTCGCCC GGGTCGGCCT CGAGGCCAGC GCGGCCGGGC GCTACCCGCA CGAGTTCTCC GGCGGTCAGC GCCAGCGCAT CTGCATCGCG CGCGCGCTGG CGCTCAAGCC GATGGTGCTG GTCGCCGACG AGGCGGTGTC GGCGCTCGAC GTATCGGTGC AGGCGCAGAT CCTCGACCTG CTGGCGGAGC TGCGTGAGGA AATGAACCTC GCGATGCTGT TCATCACTCA CGATCTGCGG GTTGCGGCGG AGATCGCCGA CCGCATCGTC GTGATGCGCC GCGGCGAAAT CGTCGAGCAG GGTGATACCA AGTCGGTGTT CACTTCGCCC CAGCACGCCT ACACTCGTGC GCTATTGGAC GCCATTCCGG GCCGCAGCCT GTTCGCGGGC CCCGAGGCCT CGGCGGCGCT GGACGCGATG ACGGCATAA
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Protein sequence | MSDDILLSVE NLSVELPHGG DRSHAVSDVS LSVRRNEIVC LVGESGSGKS ITAHAVLRLL PPSLEIGTGA VRFRGEDLAH ADEGTMRRLR GGAISMIFQE PLSALNPLAR VGHQIAEAIL VHAAPRPSRA ELDARVLELI AAVGLPDPAT LVRSYPFQLS GGQRQRVMIA MAMANNPALL LADEPTTALD VTTQKQILAL IRRLQAERGM GVLFITHDFG VVADIADRVV VMRNGRVVEQ GTVDEVLRRP KDDYTKALIA AVPGSRPSAS GDRGIEGEPL LDAHGLNKTF VTGQGMFRPD RTVVAVRDVA LSLRPRETVA VVGESGSGKS TLGRIIMRLI EPDTGAIEFA GADFLQLRGE QLRAMRRKVQ IVFQDPFAAL DPRQKVGDAI ARGPMAYGVP PAEAMADAKR LLARVGLEAS AAGRYPHEFS GGQRQRICIA RALALKPMVL VADEAVSALD VSVQAQILDL LAELREEMNL AMLFITHDLR VAAEIADRIV VMRRGEIVEQ GDTKSVFTSP QHAYTRALLD AIPGRSLFAG PEASAALDAM TA
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