| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2572 |
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| Symbol | |
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| ID | 6410234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2780008 |
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| End bp | 2781030 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712450 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001991560 |
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| Protein GI | 192290955 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCGC TGGCGCAGTC GATCGGCAGC AGCCGCGGTG TGGCGATCGC CTTGGCGGTC
GTCCGCTGGG CGGTCCGCTT CGTCGCGGTG GTCCTGGTGA TCGCCACCTT CAACTTCGTG
CTGGTGCACG CAGCTCCCGG TGATCCCGCA CAGGTGATGG CCGGGCAGAG TGGATCGGCC
GACGAGCAGA TGCTGGCTCA GCTGCGCGCC GATTATGGCC TCGATAAGCC GTATCCGGTG
CAGCTGGCGA TCTACTTGAA GCGGATCGTG ACCCTGGACC TCGGCTATTC CTATCGGCAG
CAGCGCACCG TGCTGTCGCT GATCGCCGAG CGCCTGCCGG CGACGCTGTT GCTCACCTGC
AGCGCGTTCC TGCTGTCGCT CGCGGTCGGT GTTTCGCTCG GCACGCTGGC CGGAGTCCGC
GCCGGCAAAT GGTCGGACAC CGCGCTGACC GTGGTGTCGC TATTTCTCTA CGCGATGCCG
GTGTTCTGGC TCGGCCTGAT GCTGGTGCTG TTGTTCTCGG TTCAGCTCGA TTGGCTGCCG
GCGTTCGGCT ACGTCACCAT CGGCGTGCAG ATGACGCCGT TCGAGCGGAT CCGGGATATC
GCCGCGCATC TGGTGCTGCC GGTGGTCTCG CTCGGCGCCG TGCATCTGGC GATCTATGCC
CGGCTGATGC GCTCCGCCGT GATCGACGTC GCGCACCAGG ATTTCATCAA GACGGCGCGC
GCCAAGGGTT TGAAGCGCGG CCAGATCATC ATCCACCACA TGCTGCGCAA CGCGGTGCTG
CCGGTGGTCA CCGTCGCCGG CATGCAGGCC GGCACGCTGG TCGGCGGCGC GGTGGTGATC
GAAACCGTGT TTGCCTGGCC GGGTCTTGGC CGGCTCACTT TCGATGCGGT GCTGCAGCGC
GACTATCCGC TGATGCTCGG CATCTTCCTG GTGATGTCGG TGATTGTGAT CTCGCTGAAC
CTGATTACTG ACGCGATCTA CCGGATCGTC GATCCGCGCG TCTCCTTGCG TGCAGCGGCT
TAA
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| Protein sequence | MMALAQSIGS SRGVAIALAV VRWAVRFVAV VLVIATFNFV LVHAAPGDPA QVMAGQSGSA
DEQMLAQLRA DYGLDKPYPV QLAIYLKRIV TLDLGYSYRQ QRTVLSLIAE RLPATLLLTC
SAFLLSLAVG VSLGTLAGVR AGKWSDTALT VVSLFLYAMP VFWLGLMLVL LFSVQLDWLP
AFGYVTIGVQ MTPFERIRDI AAHLVLPVVS LGAVHLAIYA RLMRSAVIDV AHQDFIKTAR
AKGLKRGQII IHHMLRNAVL PVVTVAGMQA GTLVGGAVVI ETVFAWPGLG RLTFDAVLQR
DYPLMLGIFL VMSVIVISLN LITDAIYRIV DPRVSLRAAA
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