| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2571 |
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| Symbol | |
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| ID | 6410233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2778422 |
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| End bp | 2780011 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642712449 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001991559 |
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| Protein GI | 192290954 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.13754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAC GTGAATTCGC CAAACTGGGC CTGATGGCCG GCGCGCTCGG CATCGGCGGC
ATCCCGCTCG GCATCACGCG GGCCGCGGGA CAAACCCGCG GCGGCACGCT CAACACCATC
ATTCAGCCGG AGCCGCCGAT CCTGGTCACC GCGCTCAACC AGCAGCAGCC GACGCTGACG
CTGGGCGGCA AGATCTACGA GAGCCTGCTG CGCTATGATT TCGATCTCAA GCCGCTGCCG
GGCCTCGCCC AGTCCTGGGA AGTGTCGCCG GACAAGCTGA CCTACACGTT CAAGCTGTTC
CCCAACATCA CCTTCCACGA CGGCACGCCG CTGACCTCGG AAGACGTGGT GTTCTCGATC
ACGAAGATTC TGATGGAGAA CCACGCGCGC GCCCGCAACA CGTTCTCGCG CATCGACAAG
GCCGAGGCGC CGGATCCGCT CACGGTGGTC TTCACCTTGA AGAAGCCGTT CGCGCCGTTC
CTCACCGCGT TCGATTGCAC CACGGCGCCG ATCGTGCCGA AGCACATCTA CGACGGCACC
GACTATCGCA AGAACCCGGC CAACGCCAAG GCGATCGGCT CCGGCCCGTT CAAGTTGAAG
GAATGGGTGC GCGGTTCGCA CGTCCATCTG GTCAAGCACG AGGGTTACTA TCGTCCGGGT
GAGCCTGTCC TCGACGAGAT CATTTATCGC GTCATCCCGG ATTCCGCGTC GCGTTCGGTG
GCACTGGAGC AGGGGACCGT TCAGCTCACG CAGTGGACCG ACGTTGAGCT GTTCGAGGTG
CCGCGGCTGT CGAAGCTGCC GCATCTGACG ATGACCACCA AGGGCTACGA GTTCTTTGCG
CCGCATACCT GGCTGGAGAT CAACAACCGC ATCGCGCCGA TGAACGACAA GCGGTTCCGG
CAGGCGGTGA TGTATGCGAT CGACCGCAAG GCGCTGCTGA ACCGGATCTA TTTCGGCCTC
GGCAAGGTTG CGACCGGCCC CGTGTCGTCG AAGACCAAGT TCTACGAAAA GGACGTCAAG
AAGTACGACT TCTCGCCCGA GAAGGCGAAG GCGTTGCTCG ACGAGATGGG GCTGAAGCCG
GGCCCCGACG GCAAGCGCGT GACGATTCCC TTCCTGGTGC CGCCCTACGG CGAAACCCAT
CAGCGGACCG CCGAATTCCT GCGACAGTCG CTCGCCCGCG TCGGCATCGA TCTGCAACTG
CAGGGCATCG ATGTCGCGGG ATGGGCCGAG AAATTCAGCA ACTGGGATTT CTCGATGACT
ACGACCACGG TCTATCAGTT CGGCGATCCG GCGCTCGGCG TGTCGCGGAG CTACGTCTCC
TCCAACATCC GCAAGGGCAT CCTGTTCTCC AACACCTGCG GCTATTCCAA TCCGGAAGTC
GATCGGCTGT TCGAGGAGGC CGCGACCGCG ACGTCGGACG ACAAGCGTCA GGAGCACTAC
AGCGCGCTGC AGAAGATCAT GGTCGATGAG GTGCCGGTCA TCTGGCTGCT CGAGATCGAC
TATCCGAACC TCATGGACAA GCGGCTGAAG AACGTGGTGA CGTCGGCGAT CGGCGTGCAC
GACACCTTCG GGACGGTTTC GTTCGGATGA
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| Protein sequence | MNRREFAKLG LMAGALGIGG IPLGITRAAG QTRGGTLNTI IQPEPPILVT ALNQQQPTLT
LGGKIYESLL RYDFDLKPLP GLAQSWEVSP DKLTYTFKLF PNITFHDGTP LTSEDVVFSI
TKILMENHAR ARNTFSRIDK AEAPDPLTVV FTLKKPFAPF LTAFDCTTAP IVPKHIYDGT
DYRKNPANAK AIGSGPFKLK EWVRGSHVHL VKHEGYYRPG EPVLDEIIYR VIPDSASRSV
ALEQGTVQLT QWTDVELFEV PRLSKLPHLT MTTKGYEFFA PHTWLEINNR IAPMNDKRFR
QAVMYAIDRK ALLNRIYFGL GKVATGPVSS KTKFYEKDVK KYDFSPEKAK ALLDEMGLKP
GPDGKRVTIP FLVPPYGETH QRTAEFLRQS LARVGIDLQL QGIDVAGWAE KFSNWDFSMT
TTTVYQFGDP ALGVSRSYVS SNIRKGILFS NTCGYSNPEV DRLFEEAATA TSDDKRQEHY
SALQKIMVDE VPVIWLLEID YPNLMDKRLK NVVTSAIGVH DTFGTVSFG
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