| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2570 |
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| Symbol | |
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| ID | 6410232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2776754 |
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| End bp | 2778343 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712448 |
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| Product | hypothetical protein |
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| Protein accession | YP_001991558 |
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| Protein GI | 192290953 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.708956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTCG CGGCTGCGGC GGCGTCCGCC GTGCAATCGA TGACGGGAGC GGACCGGCTC
TGCGATGCGC TGCTGGCGCA CGAGGTCGAC GTCTGCTTCG CCAATCCCGG CACGTCGGAG
ATGCATTTTG TGGCGGCGCT CGATCGTCAG CCGCGGATGA GGTGCATCCT CGGGCTGTTC
GAAGGCGTCG TCACCGGCGC CGCCGACGGC TACGCCCGGA TGACCGACCG GCCGGCGGTG
ACGCTGCTGC ATCTCGGCCC CGGTCTCGCC AACGGCCTCG CGAACATGCA CAACGCGCGG
CGCGCGCATT CGCCGATGAT CAACATCGTC GGCGATCATG CGGTCGAGCA TCTGCCGCTC
GATGCCCCGC TGACCAGCGA CATCGACTCG CTGGCGCGGC CGATGTCGCG ATGGGTCAAG
CGGATCGCCG ATCCGGTGCG GATCGATCAG GACGTCGCGG ACGCGTGGTC GCAGAGCATG
GCGCCGGGCA TCTCGACGCT GATCCTTCCC GCGGACATGG CGTGGAATGA ACACAGCTAT
CGCTCCCAGC CGGTGCGCGG CAAACGTCTG CCGCAGACGC CACTGGTGCA GGAGATGGTC
GTGCGCATCG GCGCCGCGAT CCGTACCAAA CGCAAGGTGG TGCTGATGCT GTCCGGCGGC
GCGCTGCGCG AGCACCCGCT CCGGATCGCC GACAACATTC GCCGCAGCGC CGGCGTGGAA
ATCTACGCAC AGGGCGCCAA TGGCCGGATC GAGCGCGGCC GGGGCCGGGC GCCGATCGCC
AAGCTGCCGA TGACCCACGA GATCGGCATC GAGATGCTGC GCGGCGCCGA CATGGTGGTG
CTGATCGGCG CCAAGGAGCC GGTGTCGTTC TTCGCTTATC CGAACCGTCC GGGCCGGCTG
GCGCCGCCGA ATTGTGAGAT CGTGCAGCTC GCCGGGCCAG ATCAGGACCT GGTGCAGGCG
CTGGAATGGC TCGCCGACGA AGTGAATGCG CCGAACGAGC CAGTGGCGGT TGCGCCGTTC
GCCGTTCCTG CGCCGACCGT GGGTCCCAAT GCCGCTCTCA CCGTCGACAT GGTGAACCGC
CTGGTCGCCG CGCGGCTGCC GGATCAGGCG ATCGTCTGCG ATGAGGCGCT GACCTCGTCC
GGCTTCTTCG ACTATTCGTA TGACGCGGCT CCGCATGATT ATCTGCAGAT CACCGGCGGC
GCGATCGGGA TCGGCATCCC GATGGCAGCA GGCGCTGCGG TGGCGTGCCC GGCTCGCAAG
GTGATCAATC TGCAGGCCGA CGGCAGCGGC ATGTACACGC TGCAGGGGCT CTGGACCCAC
GCCCGCGAAA ACCTCGACGT CGTCACCATC GTGTTCTCGA ACCGCTCCTA CGCCACGCTG
TGGGGCGAGA TGAGCAAGGT CGGCGCGCAG ACGCCGGGCC GCAACGCGCA GCGGATGCTG
CAACTCGACC AGCCCGAACT CGACTGGTCG AAGATGTCGC AAGGCCTCGG CGTCGAGGCC
AGCCGGGCCA CCACGCTGTC GGAATTCTCG CGTGCGCTCG ATGCGGCGCT CGCGCGGCGT
GGTCCGTATC TCATCGAGGC GATGGTCTGA
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| Protein sequence | MTVAAAAASA VQSMTGADRL CDALLAHEVD VCFANPGTSE MHFVAALDRQ PRMRCILGLF
EGVVTGAADG YARMTDRPAV TLLHLGPGLA NGLANMHNAR RAHSPMINIV GDHAVEHLPL
DAPLTSDIDS LARPMSRWVK RIADPVRIDQ DVADAWSQSM APGISTLILP ADMAWNEHSY
RSQPVRGKRL PQTPLVQEMV VRIGAAIRTK RKVVLMLSGG ALREHPLRIA DNIRRSAGVE
IYAQGANGRI ERGRGRAPIA KLPMTHEIGI EMLRGADMVV LIGAKEPVSF FAYPNRPGRL
APPNCEIVQL AGPDQDLVQA LEWLADEVNA PNEPVAVAPF AVPAPTVGPN AALTVDMVNR
LVAARLPDQA IVCDEALTSS GFFDYSYDAA PHDYLQITGG AIGIGIPMAA GAAVACPARK
VINLQADGSG MYTLQGLWTH ARENLDVVTI VFSNRSYATL WGEMSKVGAQ TPGRNAQRML
QLDQPELDWS KMSQGLGVEA SRATTLSEFS RALDAALARR GPYLIEAMV
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