| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2568 |
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| Symbol | |
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| ID | 6410230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2773946 |
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| End bp | 2775406 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712446 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001991556 |
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| Protein GI | 192290951 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.951924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAGA TGCTGATGCC GAGTGATCCC GGCCTGTTGG CCGAGCGCTG CCTGATTGGC
GGCAAGTGGT GTGGTGAGCC GGTCGATGCC GTGTTCAATC CGGTGACCGG TGAACGCATC
GGCGCGGTGC CGCGGTTTGG CACCGACGAA GCCGAGGAGG CGGTGCGTGC CGCCGAGATC
GCGTTCCGGC AGTGGTCGAA GCTGCTCGCC AAGCAGCGCG CCACGATGCT GCGCGCGTGG
TTCGATCAGA TCATCGCTAA CCGCGACGAT CTGGCGCTGC TGCTGACGCG CGAGCAGGGC
AAGCCGCTCG CCGAAGCGCT CGGTGAAATC GACTACGCGG CATCGTTCGT TGAGTTCTAC
GCCGAGGAGG CGCGGCGCAT CTACGGCGAA ACAATTCCGT CGCATCGCGC CGACGCCCGC
ACGATGGTGA TCCGACAGCC GGTTGGTGTC GTCGCGGCGA TCACGCCGTG GAACTTCCCC
GCCGCGATGA TCACCCGCAA AGTTGCGCCG GCGCTTGCCG CCGGCTGCAC CGTGGTGATC
AAGCCGGCGC CGGAAACGCC GCTCACCGCG CTGGCGCTCG GTGTGCTGGC GCAGCGTGCC
GGCTTTCCGC CGGGCGTGCT CAACATCATC ACCGGCGATG CGCCGGCGAT CGGCAAGGCG
TGGACCGAGC ATCCGACGGT GCGGGCGATC AGCTTCACCG GCTCGACCGA GGTCGGCAAG
ATCCTGATGC GCCAGGCCGC CTCGACCGTG AAGAAGGTCG CGCTCGAACT CGGCGGCAAC
GCGCCCTTCA TCGTGTTTGA CGATGCCGAT CTCGATGCTG CGGTCGAAGG TGTGATCGCC
TCGAAGTTCC GCAACATGGG GCAGACCTGC GTCTGCGCGA ACCGCATCTA CGCCCAGGAC
GGGATCTACG ACGCCTTCGT CGAGAAGCTC ACCGCCAAGG TGGCGACGCT GCAGGTCGGC
AACGGTGTCG ATGCCGGCGT GACCCAGGGG CCGCTGATCA CCACCGAAGC GATCGCCAAG
GTCGAGCGTC ATGTGTCCGA CGCGGTCGCC AAGGGCGCCA AGGTCGTACT CGGCGGCAAG
CGGCACAAAC TGGGGCGCAC CTTCTTCGAG CCGACCGTGC TCGCCGGCGT CACCACAGCG
ATGCTGATCA CGCGCGAAGA GACCTTCGGC CCGGTGGCGC CGGTGTATCG CTTCACCGAC
GAAGCCGACG TGATCGCGCA GGCGAACGAC TCGCCGTTCG GCCTGGCGTC CTACTTCTAC
GCACGCGACC TCGGACGCGT ATTCCGCGTC GCCGAGGCGC TGGAGTCCGG CATGGTCGGC
GTCAACTCGG CGCTGCTCGG CGCCGACGTG GTGCCGTTCG GCGGCGTCAA GCAGTCCGGC
CTCGGCCGCG AGGGTTCGCG CCACGGCATC GAGGAATACG TCGAGACCAA ATATATCCTG
CTCGGCGGTC TCGATCGCTG A
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| Protein sequence | MIEMLMPSDP GLLAERCLIG GKWCGEPVDA VFNPVTGERI GAVPRFGTDE AEEAVRAAEI
AFRQWSKLLA KQRATMLRAW FDQIIANRDD LALLLTREQG KPLAEALGEI DYAASFVEFY
AEEARRIYGE TIPSHRADAR TMVIRQPVGV VAAITPWNFP AAMITRKVAP ALAAGCTVVI
KPAPETPLTA LALGVLAQRA GFPPGVLNII TGDAPAIGKA WTEHPTVRAI SFTGSTEVGK
ILMRQAASTV KKVALELGGN APFIVFDDAD LDAAVEGVIA SKFRNMGQTC VCANRIYAQD
GIYDAFVEKL TAKVATLQVG NGVDAGVTQG PLITTEAIAK VERHVSDAVA KGAKVVLGGK
RHKLGRTFFE PTVLAGVTTA MLITREETFG PVAPVYRFTD EADVIAQAND SPFGLASYFY
ARDLGRVFRV AEALESGMVG VNSALLGADV VPFGGVKQSG LGREGSRHGI EEYVETKYIL
LGGLDR
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