Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2558 |
Symbol | |
ID | 6410220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2764389 |
End bp | 2765063 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642712436 |
Product | cytochrome B561 |
Protein accession | YP_001991546 |
Protein GI | 192290941 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.952608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAG CGAGCGTCGT CGCCTGGGAC GGGCCTACGC GCGTCTTCAA GTGGGCGCTC GTCTTCGTCG TCCTCGATGG CTGGATCAGC AACACCTATG GCGGGGCCTA TCCCGCCTGG CACAAGCTCA ATGGCTATAC GGCGCTGGTG CTGATCGTCT TCCGCATCCT GTGGGGCTTC GTCGGCGGTT CGACCGCCCG GTTCGGCAGC TTTGTCGCGA TGCCGGGCAA GGTGCTGGCC TACATCGCCG ACAAGAAGAA GTTTCTCGGC CACAATCCGC TCGGCGGGTG GATGGTGGTG GCGCTGCTGG CGCTGGTGCT GGCCATGGCG ATCAGCGGGC TGTTCTCGGC GGATGAAGAC CGCCTGATCA TCGAAGGGCC GCTCGCCAAG ACCGTGGCCG ATGCCACCGT CGACACCGCC GCGCTGTGGC ACCGGCGGAT CTTCACCGCG ATCGAGGTGT TCGTTGCGCT CCACGTCGCG GCGAACGTGA TCTACGCGCT CACCAGCCGT GAGCCGTTGA TCCAGGCGAT GATCACCGGC CGCAAGCCCG CCGACACTTA TGCGGATATG CCGGCCGCCG AACCCGGCCC ATGGGGGAGG GCGTTCGCTT GCCTTCTCGT GGCGGCGTTC GTGGTGCTGG CGCCGATCTA TGTGATCGGG GGACGGCTGC TTTAA
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Protein sequence | MNEASVVAWD GPTRVFKWAL VFVVLDGWIS NTYGGAYPAW HKLNGYTALV LIVFRILWGF VGGSTARFGS FVAMPGKVLA YIADKKKFLG HNPLGGWMVV ALLALVLAMA ISGLFSADED RLIIEGPLAK TVADATVDTA ALWHRRIFTA IEVFVALHVA ANVIYALTSR EPLIQAMITG RKPADTYADM PAAEPGPWGR AFACLLVAAF VVLAPIYVIG GRLL
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