Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2557 |
Symbol | |
ID | 6410219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2763945 |
End bp | 2764385 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712435 |
Product | cytochrome c prime |
Protein accession | YP_001991545 |
Protein GI | 192290940 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.524451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGA GAATTGCTAC TATCGCCGGG CTGGTTGTGC TGGGCAGCGG CTTCGCGGTC GCGCAGACCG ACGTGATCGC GCAGCGCAAG GCGATCCTGA AGCAGATGGG CGAGGCGACC AAGCCGATCG CCGCGATGCT GAAGGGCGAG GCGAAGTTCG ACCAGGCGGT GGTGCAGAAG TCGCTGGCCG CGATCGCCGA CGACTCCAAG AAGCTGCCGG CGCTGTTCCC GGCCGACTCC AAGACCGGTG GCGACACCGC GGCGCTGCCG AAGATCTGGG AAGACAAGGC GAAGTTCGAC GACCTGTTCG CCAAGCTGGC CGCTGCGGCC ACCGCGGCGC AGGGCACGAT CAAGGATGAA GCCTCGCTCA AGGCGAACAT CGGCGGCGTG CTCGGCAACT GCAAGTCGTG CCACGACGAC TTCCGCGCCA AGAAGAGCTA A
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Protein sequence | MKLRIATIAG LVVLGSGFAV AQTDVIAQRK AILKQMGEAT KPIAAMLKGE AKFDQAVVQK SLAAIADDSK KLPALFPADS KTGGDTAALP KIWEDKAKFD DLFAKLAAAA TAAQGTIKDE ASLKANIGGV LGNCKSCHDD FRAKKS
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