Gene Rpal_2549 details

Gene Information

• Locus tag: Rpal_2549
• ID: 6410211
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2755364
• End bp: 2755912
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642712427
• Product: cytochrome B561
• Protein accession: YP_001991537
• Protein GI: 192290932
• COG category: [C] Energy production and conversion
• COG ID: [COG3038] Cytochrome B561

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.481387
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGACGA CAGCTGCCGC GCAGGAGCGC TACACGCGTA CGGCCATCTT TCTGCACTGG 
TGCATGACAG CAATGATCGT CGGGCTGATC GGCCTTGGCT TCTACATGGG ACAGCAGCCG 
CCTTCGCCCG AGAAGTATGC GCTCTACGAG CTGCACAAGT CGCTCGGTGT CGTGACGGTG 
CTGCTGCTGT TCGCACGCTT CATCTGGCGC GCCGCCAATC CGCCGCCGGA GCTGCCGACA 
GCCTATTCGC AGCTACTCCG CACCGCCAGC CATCTCGGGC ACTTTGCACT TTACGTGCTG 
ATGTTCGCCG TGCCGGTCAG CGGCTGGGTG ATGAGCGCTG CTTATGGTCG ACCGGCGTCG 
CTGTTCGGCG TGCCGATTCC GCCGCCGGTC ACCAAGAGCG AGGATCTCGC CGAACTCTGG 
GGCACGATCC ACTTCGCTCT CGGATCGGCG CTGGCGCTGG TGATCGCGGG GCACACGCTG 
TTCGCGCTCA AGCATCACTT CATCGACAAG GATGGGCTGC TGTGGCGAAT GTGGGTCCGA 
TGCCCCTGA 

 

Protein sequence

METTAAAQER YTRTAIFLHW CMTAMIVGLI GLGFYMGQQP PSPEKYALYE LHKSLGVVTV 
LLLFARFIWR AANPPPELPT AYSQLLRTAS HLGHFALYVL MFAVPVSGWV MSAAYGRPAS 
LFGVPIPPPV TKSEDLAELW GTIHFALGSA LALVIAGHTL FALKHHFIDK DGLLWRMWVR 
CP