| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2530 |
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| Symbol | |
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| ID | 6410192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2730460 |
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| End bp | 2732286 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642712408 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001991518 |
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| Protein GI | 192290913 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.187337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGGA TGAATCGTAA CGAGCGGAGG AAGCAGGCGA AGCTGGTCCC CAAGGGCAGC
GGCCCGCCCC CGCAACCCAA TGCCGGACAG CAATGGTTTG CGGCCGCGGT TCAGCACCAT
CAGCAGGGCC GGCTGGCGGA GGCCGAGGCG CTGTACCGGC AGGTGCTGAA TGTGGATGCG
CGCCATGCCG ACGCCTGGCA TCTGCTCGGC GTGCTCGCGC TGCAGGTCGG GCGCAACGAT
ATCGCGCTGG AGATGATCGG CAAGGCGATC TCGCTCAACC GGATGGTCGC CGCCTATCAC
GGCAATCGCG GGCTGGCGCT GGACGGCCTC GGGCGCCCCG CGGAGGCGCT GGCGTCTTAC
GACGCGGCGC TGGCGATCGA GCCGCGCGTT GCCGAGGCGC ACTGCAATCG CGCCGCCGCG
CTGATCACGC TCGGCCGGCC CGAGGACGCC CTGCGCGCGG CCGAGGCGGC GCTGCGGCTG
CAGCCGGATG ACGTCAACGC GAAGATCAAT CGCGGCAACG CGCTCCGCGA TCTCGGCCGG
CTGGACGAGG CGCTATCCGC CTATGAGACC GTGTTACGAA CGGCCCCCGG CAATGCGCTG
GCGCAGACCA ACCGCGGCAT CGTCCTCAAG ACGCTGGGGC GGCTCGACGA GGCCCTCGCC
TGCTACGACG CCGCGCTGCA AGCCGATCCC AACCTCGCCG AAGCGCACAC CAATCGCGGC
GTCACGCTGA AGAACCTGTT GCGGCTCGAC GAAGCCCTGA CCGCCTGCCA GAAGGCGATT
CAGCTGCAGC CGCGCAGCGC CGATGCCCAT TACAATCTGG CCACCGTATT GCACGATCAG
TGCCGGCTCG ACGACGCACT CGCCAGCTAC GATCAGGCGC TGGCGCTGCG GCCCGACTTC
GCCATGGCGC GCTGGAATCG CGCCTGTATC CTGCTGTCGA CGGGCCGTTT CCAGGAAGGC
TGGCGCGAAC ACGAATGGCG GTCGCACAGG GAAAGCGCGC CGCGGCAATT TCCGCAGCCG
CAGTGGAGTG GCGAAGCGCT CGCCGGCCGA ACCCTGCTGC TGCATGCCGA GCAGGGTCTC
GGCGACACGC TGCAATTCCT GCGCTACGTA CCCAAGGTTG CGGCGACGGG CGCGCGGATC
ATCCTGGCGG TGCCGGGACC GCTGCACCGC CTCGTCGCGC AGTCATTCCC CGACGTTGTC
GTCGTCGACG ATGCCGGCGC CCTGCCCGCG TTCGACTTGC ACTGCCCGCT GCTGTCGCTG
CCGCTGTGCT TCGGCACCAC GCTCGAGACC ATTCCGGCGG ACGTCCCGTA TCTGTCCGCC
GATCCCGCCG CGGTGGCGCG CTGGCGCGAG CGCCTCAGCG CAGGATCGCG TCCCAAGGTC
GGTCTGGTCT GGGCCGGCAA TCCGCGACAC GCCAACGACC GCAACCGCTC GCTCCCGTTC
GCGCAATTGG CGCCCCTGTT CAACCTTGCT GGCATCGAGT GGATTTCATT GCAGGTCGGC
GACCGCCGCA CCGATCTGGC TCAGGCGCCA GCGGGCCTCC TTCGCGATGT CGCGGATGAT
CTGACCGACT TCGCCGAGAC CGCCGCCGCG GTGAGTGCGC TCGACCTCAT CGTCTCCGTC
GACACCGCAG TGGCCCACCT CGCCGCCGCG CTGGCGCGAC CGGTGATCAT GGCGATCCCG
TTCGTGCCCG ATTGGCGATG GCTGCTGGCC CGCGAGGACA GCCCCTGGTA TCCGACCGTC
CGCCTGGTGC GCCAAACCCG GCCGCAGGAC TGGGACGGCG TCGTGACCAA ACTCGCCGCA
ACGCTGACGC GCTTCATCGA GACATGA
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| Protein sequence | MTGMNRNERR KQAKLVPKGS GPPPQPNAGQ QWFAAAVQHH QQGRLAEAEA LYRQVLNVDA
RHADAWHLLG VLALQVGRND IALEMIGKAI SLNRMVAAYH GNRGLALDGL GRPAEALASY
DAALAIEPRV AEAHCNRAAA LITLGRPEDA LRAAEAALRL QPDDVNAKIN RGNALRDLGR
LDEALSAYET VLRTAPGNAL AQTNRGIVLK TLGRLDEALA CYDAALQADP NLAEAHTNRG
VTLKNLLRLD EALTACQKAI QLQPRSADAH YNLATVLHDQ CRLDDALASY DQALALRPDF
AMARWNRACI LLSTGRFQEG WREHEWRSHR ESAPRQFPQP QWSGEALAGR TLLLHAEQGL
GDTLQFLRYV PKVAATGARI ILAVPGPLHR LVAQSFPDVV VVDDAGALPA FDLHCPLLSL
PLCFGTTLET IPADVPYLSA DPAAVARWRE RLSAGSRPKV GLVWAGNPRH ANDRNRSLPF
AQLAPLFNLA GIEWISLQVG DRRTDLAQAP AGLLRDVADD LTDFAETAAA VSALDLIVSV
DTAVAHLAAA LARPVIMAIP FVPDWRWLLA REDSPWYPTV RLVRQTRPQD WDGVVTKLAA
TLTRFIET
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