| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2528 |
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| Symbol | |
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| ID | 6410190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2727164 |
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| End bp | 2730139 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712406 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001991516 |
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| Protein GI | 192290911 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.122653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGCC CAAGTCACGA GCAACAGATA CCCAACCTGG CGGCACTGTT CACGGACCGT
CAGCGCGCCA AGGACCAGTT CATCGCCGCG CTCGACGAGC CCACGGGGGC GCGCGGCTAC
AAGGTCCTGA ATTGGAGCGG TGTCGGGGGC CAGGGAAAGA CAGCCCTGCT CGAAGAGTTC
GAGCGCATCC TGCGCAAGCG TCACGCGCGC GCCTGCGATC TGTCGACGAC CCGCCCAGGC
TTCGCGCTGA TCGACTTCCG CGATCCGGCG AACAGGTCTA TCGCGCTGTC GCTACTTTCG
ATCCGCGAGC AGCTCCGGAA GACGGCCGGA CTGCACTGCG AGACATTCGA AGCCGCGATC
CTACGCTATT TGATGATGAC CCAGCCGGGA ACAGCCATCA AGGAGCTCAG TGCACAGTTT
TTCACCACTG GCTCTGACGT GCTTGACGGC GTGATTCAGG CCGTCAGCGC CGCGGGCGAA
CTCGGAGCGA CGACACACCC GCTGCCGGGC TTTGGTCTAC TGTCGAAATA CGGCATGAAG
CTCGCTGGCA AGGCCGGCCT TGCCTTCCAT CGGTGGTGGA CGCGACGCGG CAGGAGCGCC
TTCGTCGAAA TCGATGCGCT GTCGCAAGAC GCCCTGCTGC GCAAGCTGCC GACCTATCTC
GGCGCTGACC TGATGGACGC AATGGCAGTC GATCATCCGC CGCGCATCAC CATCCTGTTC
GATACGTATG AGGCGTTGTG GCACGGCCAA GGGCTCAGGC ACGGTCCGGG ATCGCTGCGC
ATCGACGAGT GGGTGCGTCA GCTCGTCCAG GACGCCCGCG GCGTGCTCTT CGTCATCGCC
GGGCGCGACG AGCTTCGCTG GCAGGAGCTG GATAGGTCTT GGGCGACGGT CATCGAGCGC
CATCCGTTCG GAGGCCTGAA CAAGGTCGAT GCCGGAAAGC TGCTGGCCAA GCTTGGGATA
GCGGAGCCCG CGCTCCGAGA GCGGATGATC AGCGGCGCGC GAAGTCGCAC GTTCGGCGAA
ATCGACCCGA GTGACAACGA GGCCGAGGCC TATCTGCCAT TCTATTTGAC GCTTCAGGCG
CGCGACTACC ACCACATCGA GGCTGCCGAC CGGACGCCGA CGCCGGATGA TTTCGGCGGC
GAGCATCCCG AGGTCCTGGC GCGTTTCCTG GAGCATCTGG ATGCCGAAAC TGACAAGCTG
CTGCGGATCG CGAGTTATCT GTCCACGCTG GAACCGACCG TGCTCGACGG GCTGGCGGAT
GCGTTCCTCG GCGGCCGCGC GCAGGCCGAC TGGACGCGGA TCCATGGCGA GGGGGTCACG
TCCACGGACA GGGATGGTGC CCGCTATCTG CACGACTTGA TGCGCCAGGC GCTGCAGGAG
CGCGAGAAAC ATCAGCGGCC GGTGCTTTAT CGCGACATTC ATCGGCACCT GTTCGAACGG
TTCGCGCAGA TTTGCGACGA GCCTGATCCG CGTGCGATCA CCGTGCAACA TGAGCGCGCC
TTCCTCGCCG CCCTGCGGCA CTTGTCTCGG GTTGACGAGT CCGAAGCCGT TCGCTGGGCC
AATCAGCAGA TGCAGCGCTT CAACGACGCC GCCAGATGGC GGGGACTCGA GGAAGCCTGC
ACGACGGTGC TGCCGCTCGC CGAACGGGCA TTTGGCGGTG AGAACGAGTG GACGACCGCG
ACCCTCTCCT GGCTCGCCGT CGCGTCAGGG AACACCGGCC GCTATGCCGA GGCTGAGACG
CTCTACGAGC GCGTCAAGGC GATCGACGAG AAAACGCTGG GGCCGGAGCA TCCATCCCTC
GCGACGACGC TTGCCAACCT TGCAGGTGTC TACAGAGACA CCGGCCGCTA TGCCGAGGCT
GAGACGCTCT ATGAGCGCGT CAAGGTAATC GAAGAGAAAA CGCTGCGGCC GGAGCATCCA
TCCCTCGCGA CGACGCTTGC CAACCTTGCA GGTGTCTACA GAGACACCGG CCGCTATGCT
AAGGCTGAGA CGCTTTACGA GCGCGTCAAG GCGGTCGAAG AGAAAACGCT GGGGCCGGAG
CATCCATCCT TCGCGGCGAC ACTTTCCAAC CTCGCAGGTG TCTACAGCGA CACCGGCCGC
TATGCGGAGG CTGAGACGCT CTACGAGCGC GTCAAGGCGA TCTACGAGAA AACGCTGGGG
CCGGAGCATC CATCCCTCGC GACGACGCTT GCCAACCTTG CAGGTGTCTA CAGAGACACC
GGCCGCTATG CCGAGGCTGA GACGCTCTAC GAGCGCGTCA AGGTAATCGA AGAGAAAACG
CTGGGGCCGG AGCATCCATC CTTCGCGGCG ACGCTTTCCA ACCTCGCAGG TGTCTACAGC
GATACCGGCC GATATGCCGA GGCTGAGACG CTCTACGAGC GCGTTAAGGT AATCGAAGAG
AAAACGTTGG GGTCGAAGCA TCCATCCTTC GCGACGACGC TTTCCAACCT CGCAGGTGTC
TACAGCGACA CCGGCCGCTA TGCCGAGGCT GAGACGCTCT ACGAGCGTGT CAAGGCGATC
TACGAGAAAA CGTTGGGGCC GGAGCATCCA TTCTTCGCGA CGACGCTTTC CAACCTCGCG
GGTGTCTACA GCGACACCGG CCGCTATGCG GAGGCTGAGA CGCTCTACGA GCGCGTCAAG
GCGATCTACG AGAAGGCGCT GGGGCCGGAG CATCCATGGT TCGGCGCGCT GCTTGTCGGC
ATGGCCCGGC TCTACGTCGA AACGGATTGT GGCGTGACAG CGGAACAGCT TCTCAAAGCG
GCGATGGCCG TGTTCGCGGC GAAGCTCCCG CCGCGACATC GTTACGTTGC AAAGTTATTG
ATAGTGCGCG GCCGCCTTCA CACGCATCTG CACCGATCCG CCGAGGCCCA TCATGACTTT
CAGGATGCCA TCGCGATGCT CGAATCGCTT CGTGTGCGGC CAGAGCAACA CTTGATGCGG
TTGGCAAAGC AAGGCCTGGG GACCGCGCGT GCGTAA
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| Protein sequence | MISPSHEQQI PNLAALFTDR QRAKDQFIAA LDEPTGARGY KVLNWSGVGG QGKTALLEEF
ERILRKRHAR ACDLSTTRPG FALIDFRDPA NRSIALSLLS IREQLRKTAG LHCETFEAAI
LRYLMMTQPG TAIKELSAQF FTTGSDVLDG VIQAVSAAGE LGATTHPLPG FGLLSKYGMK
LAGKAGLAFH RWWTRRGRSA FVEIDALSQD ALLRKLPTYL GADLMDAMAV DHPPRITILF
DTYEALWHGQ GLRHGPGSLR IDEWVRQLVQ DARGVLFVIA GRDELRWQEL DRSWATVIER
HPFGGLNKVD AGKLLAKLGI AEPALRERMI SGARSRTFGE IDPSDNEAEA YLPFYLTLQA
RDYHHIEAAD RTPTPDDFGG EHPEVLARFL EHLDAETDKL LRIASYLSTL EPTVLDGLAD
AFLGGRAQAD WTRIHGEGVT STDRDGARYL HDLMRQALQE REKHQRPVLY RDIHRHLFER
FAQICDEPDP RAITVQHERA FLAALRHLSR VDESEAVRWA NQQMQRFNDA ARWRGLEEAC
TTVLPLAERA FGGENEWTTA TLSWLAVASG NTGRYAEAET LYERVKAIDE KTLGPEHPSL
ATTLANLAGV YRDTGRYAEA ETLYERVKVI EEKTLRPEHP SLATTLANLA GVYRDTGRYA
KAETLYERVK AVEEKTLGPE HPSFAATLSN LAGVYSDTGR YAEAETLYER VKAIYEKTLG
PEHPSLATTL ANLAGVYRDT GRYAEAETLY ERVKVIEEKT LGPEHPSFAA TLSNLAGVYS
DTGRYAEAET LYERVKVIEE KTLGSKHPSF ATTLSNLAGV YSDTGRYAEA ETLYERVKAI
YEKTLGPEHP FFATTLSNLA GVYSDTGRYA EAETLYERVK AIYEKALGPE HPWFGALLVG
MARLYVETDC GVTAEQLLKA AMAVFAAKLP PRHRYVAKLL IVRGRLHTHL HRSAEAHHDF
QDAIAMLESL RVRPEQHLMR LAKQGLGTAR A
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