| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2527 |
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| Symbol | |
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| ID | 6410189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2724503 |
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| End bp | 2726128 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712405 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001991515 |
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| Protein GI | 192290910 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0244653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACA CCGCTGTTCC GGCCGAAGCG CCGTCCTCGA CCCCGTATTC GCTCGCCCAT
GAAGTGGCGC GGCGGCGCAC CTTTGCGATC ATTTCGCATC CTGACGCCGG CAAGACCACG
CTGACCGAAA AGCTGCTGCT GTTCGGCGGC GCCATCAATC TCGCTGGTCA GGTCAAGGCC
AAGGGCGAGC GCCGCAACAC CCGGTCGGAC TGGATGAAGA TCGAGCGCGA CCGCGGCATC
TCGGTGGTCA CCTCGGTGAT GACCTTCGAG TTTGACGGCC TGGTGTTCAA CCTGCTCGAC
ACTCCGGGCC ACGAGGACTT CTCGGAAGAC ACCTACCGGA CGCTGACCGC GGTCGACAGC
GCCGTGATGG TGATCGACGC CGCCAAGGGC ATCGAGGCGC GCACCCGCAA GCTGTTCGAG
GTCTGCCGGC TGCGCGACAT TCCGATCATC ACCTTCATCA ACAAGATGGA CCGTGAGAGC
CGCGACACCT TCGATCTGCT CGACGAGATC GAGAAGACGC TGGCGCTCGA CACCACGCCG
ATGACCTGGC CGGTCGGGCG CGGCCGCGAC TTCCTCGGCA CCTACGACGT GCTCGACGGC
GGCGTGCGTC TGCTCGACGG CGGCGGCGCC AAGACCGGCG CGGCCGAACA GATCAGCATC
GAGGAACTCG GCAAGCGCCA CGCCAATCTC GACGTCGCCG CGGTCAAGGA GGAGCTGGAG
CTCGCCACCG AGGCGTGCAA GCCGTTCGAC CTCGAAGCGT TTCGCGAAGG CCATCTGACC
CCGGTGTATT TCGGCTCGGC GCTACGAAAC TTCGGCGTCG GCGATCTGCT GCAGGGGCTC
GGCCGCTACG CGCCGCCGCC GCGCGCGCAG GAAAGCAACC TGCGCAAGAT CGCGGCCGAC
GAACCGAAGA TGAGCGCCTT CGTGTTCAAG ATCCAAGCCA ACATGGATCC GAACCACCGC
GACCGGATCG CGTTCGCGCG GCTGTGCTCG GGCAAGCTGA CCCGCGGCAT GAAGGCCAAG
CTGGTTCGCA CCGGCAAGGC GATGCCGCTG TCGAGCCCGC AATTCTTCTT CGCGCAGGAC
CGCTCGGTGG CCGACGAGGC GTTCGCCGGT GACGTCGTCG GCATTCCCAA CCACGGCACG
CTGCGGATCG GCGATACGCT GACCGAGGGC GAGGATGTGA CCTTCATTGG CGTGCCGAGC
TTCGCGCCGG AAATCGTCCG CCGTGTCCGG CTCGGCGACG CGATGAAGGC CAAGAAGCTG
AAAGAGGCGC TGCAGCAGAT GTCGGAAGAG GGCGTCGTGC AGGTGTTCCG CCCGCGCGAC
GGCGCCCCGG CGCTGGTCGG CGTCGTCGGC CCGCTGCAGC TCGACGTGCT GAAGGCGCGG
CTGGAGGCCG AGTATCAGCT CCCGGTCGAT TTCGAAGTCT CCGAATTCCA GCTCGCGCGC
TGGATCTCGT CCGACGACCG CAAGAAGCTC GACACCTTCA TCGCCAACAA CGGCTCATCG
ATCGCCGACG ACGTCGACGG CGATCCGGTG TACCTCGCCA AGAACGAGTT CTACCTCGGC
TACACCCGCG ACCGCGCCGA GGGCATTGTG TTCTCGGAGA TCAAGGACGT GAAGAAGGTG
GCGTGA
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| Protein sequence | MSDTAVPAEA PSSTPYSLAH EVARRRTFAI ISHPDAGKTT LTEKLLLFGG AINLAGQVKA
KGERRNTRSD WMKIERDRGI SVVTSVMTFE FDGLVFNLLD TPGHEDFSED TYRTLTAVDS
AVMVIDAAKG IEARTRKLFE VCRLRDIPII TFINKMDRES RDTFDLLDEI EKTLALDTTP
MTWPVGRGRD FLGTYDVLDG GVRLLDGGGA KTGAAEQISI EELGKRHANL DVAAVKEELE
LATEACKPFD LEAFREGHLT PVYFGSALRN FGVGDLLQGL GRYAPPPRAQ ESNLRKIAAD
EPKMSAFVFK IQANMDPNHR DRIAFARLCS GKLTRGMKAK LVRTGKAMPL SSPQFFFAQD
RSVADEAFAG DVVGIPNHGT LRIGDTLTEG EDVTFIGVPS FAPEIVRRVR LGDAMKAKKL
KEALQQMSEE GVVQVFRPRD GAPALVGVVG PLQLDVLKAR LEAEYQLPVD FEVSEFQLAR
WISSDDRKKL DTFIANNGSS IADDVDGDPV YLAKNEFYLG YTRDRAEGIV FSEIKDVKKV
A
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