Gene Rpal_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2518 
Symbol 
ID6410180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2715574 
End bp2716320 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID642712396 
ProductABC transporter related 
Protein accessionYP_001991506 
Protein GI192290901 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.778502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAGG CGACGACATT GGACCGACCC GTATCCTCGG CCGCCGGCGC GCCGCTGCTG 
AGCGTCCGTG ATCTGCAGGC GTGGTACGGC GAGTCGCACA TCCTGCACGG CATGAATTTC
GACGTGCGCG AAGGCGAGGT GGTGACGTTG CTCGGCCGTA ACGGCGCCGG CAAGACCACC
ACGCTGAAAT CGGTGATGGG TATCGTCGGC AAGCGCAGCG GCAGCGTCAC CTTCGACGGT
ACCGACATCA GCCGGGCGTC GTCGGACAAA ATCGCCCGCC GAGGCATCGC GTTCTGTCCC
GAGGAGCGCG GCATCTTCGC CAGCCTCGAT GTCCGCGAGA ACCTGATGCT GCCGCCGCAG
GTCCGCCCAG GCGGACTGTC GCTCGACCAG ATCTTCGAGC TGTTTCCCAA CCTGCGCGAG
CGGCTGAAGA GCCAAGGCAC CAAGCTCTCG GGCGGCGAAC AGCAGATGCT GGCGATCGCC
CGCATCCTGC GCACCGGAGC CCGGTTCCTG ATGCTCGACG AGCCGACCGA AGGGTTGGCG
CCTGTGATCA TCCAGCAGAT CGGCCACACC ATCGCGCGGC TGAAGAAGGA GGGCTTCACC
ATCCTGCTGG TGGAGCAGAA CTTCCGCTTC GCCGCCACGG TGGCCGATCG CTACTACGTG
GTCGAGCACG GCAAGATCAT CGACGGCTTC GCCAATTCCG AGCTCGAAGC CAACATGGAC
AAGCTTCACA CCTATCTCGG CGTCTGA
 
Protein sequence
MVEATTLDRP VSSAAGAPLL SVRDLQAWYG ESHILHGMNF DVREGEVVTL LGRNGAGKTT 
TLKSVMGIVG KRSGSVTFDG TDISRASSDK IARRGIAFCP EERGIFASLD VRENLMLPPQ
VRPGGLSLDQ IFELFPNLRE RLKSQGTKLS GGEQQMLAIA RILRTGARFL MLDEPTEGLA
PVIIQQIGHT IARLKKEGFT ILLVEQNFRF AATVADRYYV VEHGKIIDGF ANSELEANMD
KLHTYLGV