Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2518 |
Symbol | |
ID | 6410180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2715574 |
End bp | 2716320 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712396 |
Product | ABC transporter related |
Protein accession | YP_001991506 |
Protein GI | 192290901 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.778502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGAGG CGACGACATT GGACCGACCC GTATCCTCGG CCGCCGGCGC GCCGCTGCTG AGCGTCCGTG ATCTGCAGGC GTGGTACGGC GAGTCGCACA TCCTGCACGG CATGAATTTC GACGTGCGCG AAGGCGAGGT GGTGACGTTG CTCGGCCGTA ACGGCGCCGG CAAGACCACC ACGCTGAAAT CGGTGATGGG TATCGTCGGC AAGCGCAGCG GCAGCGTCAC CTTCGACGGT ACCGACATCA GCCGGGCGTC GTCGGACAAA ATCGCCCGCC GAGGCATCGC GTTCTGTCCC GAGGAGCGCG GCATCTTCGC CAGCCTCGAT GTCCGCGAGA ACCTGATGCT GCCGCCGCAG GTCCGCCCAG GCGGACTGTC GCTCGACCAG ATCTTCGAGC TGTTTCCCAA CCTGCGCGAG CGGCTGAAGA GCCAAGGCAC CAAGCTCTCG GGCGGCGAAC AGCAGATGCT GGCGATCGCC CGCATCCTGC GCACCGGAGC CCGGTTCCTG ATGCTCGACG AGCCGACCGA AGGGTTGGCG CCTGTGATCA TCCAGCAGAT CGGCCACACC ATCGCGCGGC TGAAGAAGGA GGGCTTCACC ATCCTGCTGG TGGAGCAGAA CTTCCGCTTC GCCGCCACGG TGGCCGATCG CTACTACGTG GTCGAGCACG GCAAGATCAT CGACGGCTTC GCCAATTCCG AGCTCGAAGC CAACATGGAC AAGCTTCACA CCTATCTCGG CGTCTGA
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Protein sequence | MVEATTLDRP VSSAAGAPLL SVRDLQAWYG ESHILHGMNF DVREGEVVTL LGRNGAGKTT TLKSVMGIVG KRSGSVTFDG TDISRASSDK IARRGIAFCP EERGIFASLD VRENLMLPPQ VRPGGLSLDQ IFELFPNLRE RLKSQGTKLS GGEQQMLAIA RILRTGARFL MLDEPTEGLA PVIIQQIGHT IARLKKEGFT ILLVEQNFRF AATVADRYYV VEHGKIIDGF ANSELEANMD KLHTYLGV
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