| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2511 |
|---|
| Symbol | |
|---|
| ID | 6410173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2708713 |
|---|
| End bp | 2710515 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642712389 |
|---|
| Product | putative monooxygenase protein |
|---|
| Protein accession | YP_001991499 |
|---|
| Protein GI | 192290894 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACA CCGCACCGAA CGGCAAAGTC ACGACGCTCC TCGGACAACT CGACGACGCG
CTGAGCGCCG GCGACATCGA CCGCGCGGTC GATCTGTTTC AGACCGACTG CTACTGGCGC
GACCTGATCG CCTTCACCTG GAACATCAAG ACCATGGAGG GCAAGGATCA GGTCCGCGAC
ATGCTGAAGG CGCGGCTGAC CGACACCAAG CCGTCGCATT GGCGGATCGC CGACGGGGAG
GACGCCGCGG AGGCCGACGG CATCGTCGAG TGCTTCATCC AGTTCGACAC CGCGCTCGCC
CGCGGCGTCG GCCATCTCCG CATCAAGGAG GGCCGGATCT GGACGCTGCT GACCACCATG
GCCGAACTGA AGGGCTTCGA AGAGCCGCAG GGCCTGCAGC GTCCGATGGG CGTGAAGCAC
GGCGCCGATC CCAGCCGCAA GACCTGGAAG GAAGAACGCG ACGCCGAGGC CGCCGAACTC
GGCATCACCC GTCAGCCCTA TTGCGTGATC ATCGGCGGCG GCCAGGGCGG CATCGCGCTC
GGCGCGCGGC TGCGCCAGCT CGGCGTGCCG ACTATCATCA TCGAGAAGAA CGAGCGGCCC
GGCGATAGCT GGCGCAAGCG CTACAAGTCG CTCTGCCTGC ACGATCCGGT CTGGTACGAC
CACCTGCCCT ATCTGCCGTT CCCACCAAAC TGGCCGGTGT TCGCGCCGAA AGACAAGATC
GGCGACTGGT TAGAGATGTA CACCAAGGTG ATGGAGCTGA ATTACTGGGG CTCCACCGTC
TGCAAGCGCG CCTCCTATGA CGAAGCCGCC AAGCAATGGA CCGTGGTGGT CGAGCGCGAC
GGCCAGGAGA TCACGCTGAC GCCGAAGCAG CTGGTGCTCG CCACCGGGAT GTCGGCCAAG
CCGAACATGC CGACCTTCGA GGGCATGGAC GTGTTCAAGG GCGATCAGCA CCATTCCTCG
CAGCACCCCG GTCCGGATGC GTGGAAGGGC AAGAAAGCTG TGGTGATCGG CTCGAACAAT
TCGTCGCATG ATATCTGCGC GGCGCTATGG GAAGCCGGCG CCGACGTCAC CATGGTGCAG
CGCTCGTCGA CCCACATCGT CAAGTCGAAC TCGCTGATGG AGCTCGGGCT CGCGGGCCTC
TACTCCGAGC AGGCGGTGCA GAACGGCATC ACCACCGCCA AGGCCGACCT GATCTTCGCC
TCGCTGCCGT ACAAGATCCT GCACGAATTC CAGATCCCGA TCTACAATGC GATCCGGGAG
CGCGACGCCG AGTTCTACAA GCGGCTGGAG GCCGCCGGCT TCATGCTCGA CTACGGCGAG
GACGATTCCG GCCTGTTCAT GAAGTATCTG CGCCGTGGCT CCGGCTACTA CATCGACGTC
GGCGCTTCCG AACTGGTCGC CGACGGCCGC ATCAAGCTCA AGAGCGGCGT CGACGTTCAG
CGCCTGACCG AGCACTCCGT GATCCTCAGC GACGGCACCG AGCTGCCCGC CGATCTCGTG
GTGTATGCGA CCGGCTACGG TTCGATGAAC GGCTGGGCCG CCGACCTGAT CTCGAAAGAG
GTCGCCGACA AGGTCGGCAA GGTCTGGGGC CTCGGCTCCA ACACCCGAAA AGACCCCGGT
CCGTGGGAAG GCGAGCAGCG CAACATGTGG AAGCCGACGC AACAGGAAGG CTTGTGGTTC
CACGGCGGCA ATTTGCACCA GTCGCGCCAC TACTCGCAGT TCCTGGCGCT GCAGCTCAAG
GCCCGGATGG AAGGCCTCCC TACCCCGGTC TACGGCCTGC AACAGGTGCA TCACCAAGGT
TGA
|
|---|
| Protein sequence | MLDTAPNGKV TTLLGQLDDA LSAGDIDRAV DLFQTDCYWR DLIAFTWNIK TMEGKDQVRD
MLKARLTDTK PSHWRIADGE DAAEADGIVE CFIQFDTALA RGVGHLRIKE GRIWTLLTTM
AELKGFEEPQ GLQRPMGVKH GADPSRKTWK EERDAEAAEL GITRQPYCVI IGGGQGGIAL
GARLRQLGVP TIIIEKNERP GDSWRKRYKS LCLHDPVWYD HLPYLPFPPN WPVFAPKDKI
GDWLEMYTKV MELNYWGSTV CKRASYDEAA KQWTVVVERD GQEITLTPKQ LVLATGMSAK
PNMPTFEGMD VFKGDQHHSS QHPGPDAWKG KKAVVIGSNN SSHDICAALW EAGADVTMVQ
RSSTHIVKSN SLMELGLAGL YSEQAVQNGI TTAKADLIFA SLPYKILHEF QIPIYNAIRE
RDAEFYKRLE AAGFMLDYGE DDSGLFMKYL RRGSGYYIDV GASELVADGR IKLKSGVDVQ
RLTEHSVILS DGTELPADLV VYATGYGSMN GWAADLISKE VADKVGKVWG LGSNTRKDPG
PWEGEQRNMW KPTQQEGLWF HGGNLHQSRH YSQFLALQLK ARMEGLPTPV YGLQQVHHQG
|
|---|
| |