| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2498 |
|---|
| Symbol | guaA |
|---|
| ID | 6410160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2696001 |
|---|
| End bp | 2697698 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642712377 |
|---|
| Product | GMP synthase |
|---|
| Protein accession | YP_001991487 |
|---|
| Protein GI | 192290882 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
|---|
| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.78922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGT TGCGCCGGTC CCCATCGCCG TTTTTCCCCG TTGCGAGCCG GGCTGCGGTC
GCGTATCTGC TGCCCATGAC AGCCCCCAGC ACATCCTCCG CTTCGTCCGT CGTCCCCTCC
GGCGCCGACA CCTCGCCGCA CGTCGCTGCG ATCCACGAGA AGATCCTGAT CGTCGACTTC
GGCTCGCAGG TCACCCAGCT GATCGCCCGC CGCGTCCGCG AGGAGGGCGT GTATTCCGAG
ATCGTGCCGT TCCAGAAGGC GGAGGCCGCC TTCGCCGAGA TGAAGCCGAA AGCCGTGATC
CTGTCCGGCG GCCCGGCCTC GGTGCTGGAC GACAACGCAC CCAGCGCCCC GATGGCGATC
CTCGAAGCCG GCGTGCCGGT GCTCGGCATC TGCTACGGCG AACAGACGCT GGCCAAGCAG
CTCGGCGGCA CCGTCGAGGG TGGCCACCAC CGCGAATTCG GCCGCGCCCA GATCGAGATC
ACCGATGACT GCGCGCTGTT CGACGGTGTC TGGCAGAAGG GCGGCAAATA CGACGTCTGG
ATGAGCCATG GCGACCGCGT CACCAAGCTG CCCGACGGCT TTCGCGCGGT GGCGCAGGCG
CCGGGTTCGC CGATCTCGGT GATCGCCGAC GACACCCGCA AATTCTACGC GATGCAGTTT
CACCCCGAAG TGGTGCACAC CCCGGACGGC GCCAAGCTGC TGCGCAACTT CGTCCGCAAG
GTCGCTGGGC TGACCGGCGA CTGGACAATG CGCGCCTTCC GCGAGGAAGC GATCGAGAAG
ATCCGCGCCC AGGTCGGCAG CGGCAAGGTG ATCTGCGGCC TATCCGGCGG CGTCGACTCC
GCGGTGGCGG CGGTGCTGAT CCATGAGGCG ATCGGCGATC AGCTCACTTG CGTGTTTGTC
GACCACGGCC TCTTGCGCAA GGACGAGGGC AAGAGCGTCG TCGACCTGTT CCGGCACCAC
TACAACATCC CGCTGGTGCA TGTGGATGTG TCCGAGACCT TCCTCGGCGC GCTGAAGGGC
GTCACCGATC CGGAGCAGAA GCGCAAGACC ATCGGCAAGC TGTTCATCGA CGTGTTCGAG
GCCGAAGCCA GACGCGTCGG CGGCGCCGAC TTCCTGGCGC AGGGCACGCT GTACCCGGAC
GTGATCGAGA GCGTGTCGTT CACCGGCGGC CCGTCGGTGA CGATCAAGTC GCATCACAAC
GTCGGCGGCT TGCCCGAACG CATGAACATG AAGCTGGTCG AGCCGCTGCG CGAACTGTTC
AAGGACGAAG TCCGCGCATT GGGGCGCGAG CTCGGGCTGC CCGACGTGTT CGTCGGCCGC
CATCCGTTCC CGGGCCCCGG CCTCGCGATC CGCTGCCCTG GCGAGATCAC CGAGGAGAAG
CTCGAAATCC TGCGCAATGC GGATGCGGTG TACATCGACC AGATCCGCAA GGCGGGCCTC
TACGATGTCA TCTGGCAGGC GTTCGCCGTT CTGCTCCCGG TCCGCACCGT CGGCGTGATG
GGCGACGGCC GCACCTACGA CTACGTCGTC GGCCTGCGCG CCGTGACGTC CACCGACGGC
ATGACCGCCG ACTTCTACCC GTTCGAGATG TCCTTCCTCG GCGCCACCGC GACGCGGATC
ATCAACGAGG TCAAGGGCGT CAACCGCGTG GTGTACGACG TCACGTCGAA GCCGCCGGGA
ACGATTGAGT GGGAGTAG
|
|---|
| Protein sequence | MRRLRRSPSP FFPVASRAAV AYLLPMTAPS TSSASSVVPS GADTSPHVAA IHEKILIVDF
GSQVTQLIAR RVREEGVYSE IVPFQKAEAA FAEMKPKAVI LSGGPASVLD DNAPSAPMAI
LEAGVPVLGI CYGEQTLAKQ LGGTVEGGHH REFGRAQIEI TDDCALFDGV WQKGGKYDVW
MSHGDRVTKL PDGFRAVAQA PGSPISVIAD DTRKFYAMQF HPEVVHTPDG AKLLRNFVRK
VAGLTGDWTM RAFREEAIEK IRAQVGSGKV ICGLSGGVDS AVAAVLIHEA IGDQLTCVFV
DHGLLRKDEG KSVVDLFRHH YNIPLVHVDV SETFLGALKG VTDPEQKRKT IGKLFIDVFE
AEARRVGGAD FLAQGTLYPD VIESVSFTGG PSVTIKSHHN VGGLPERMNM KLVEPLRELF
KDEVRALGRE LGLPDVFVGR HPFPGPGLAI RCPGEITEEK LEILRNADAV YIDQIRKAGL
YDVIWQAFAV LLPVRTVGVM GDGRTYDYVV GLRAVTSTDG MTADFYPFEM SFLGATATRI
INEVKGVNRV VYDVTSKPPG TIEWE
|
|---|
| |