Gene Rpal_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2483 
Symbol 
ID6410145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp2678018 
End bp2678674 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content69% 
IMG OID642712362 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001991472 
Protein GI192290867 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0489732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCAA CTTCGCCCTT ACCCCATCGT CCACGCGGCC GCCGCCCCGC CGGGGCGCCG 
AGCGGCCGCG CCGCCCTGCT CACCGCCGCG ACCCGCGCCT TCGCCGAGCT CGGCTTCGAG 
CGCGCGGATC TGCGCAGCAT CGCCAAGGCC GCCGATGTCG ATACCGGGCT GATCCGGATC 
CATTTCGGCG ACAAGGCCGC GCTGTGGCTC GCCTGCCTCG ACGCCGTGAC CCGGGAAGCC 
GCTCCGATCA TGGCGGTGAT GACCAAGCTC TCCGCCGAAA CCGACCGCCC CGCCTATGAC 
CGGCTGCGTG AAGCGATCGA GACCTTCGTG GCGTTTGGCA TCGCCCATCC GGAAGTCCGG 
CAGTTCGTCG CGCAGCACGC CGCCGAAGCG CCGGAGCGCG CTGCGCTGCT GATCGATCGG 
CTCGCCCGTC CGGCTTATCA GTCGGTCCGC GACCTGGTTC AGGCCGGCAT CGATTGCGGC 
GTGGTGCGGA CACAGCATCC GGCGCTGTTC TTCCTGCTGC TCAGCAACTC GGTGCATCAG 
CCGCATTCGG TGCCGGTGCT GCTGAACGAG ATCGCGCCGG ACATCGCCCC CGCCGAAGCA 
CCGTCACTGC TGGCGCGCAG CATCGTCGCA ACCTTTCTGC ATTCCCCCAC CTCGTGA
 
Protein sequence
MPSTSPLPHR PRGRRPAGAP SGRAALLTAA TRAFAELGFE RADLRSIAKA ADVDTGLIRI 
HFGDKAALWL ACLDAVTREA APIMAVMTKL SAETDRPAYD RLREAIETFV AFGIAHPEVR 
QFVAQHAAEA PERAALLIDR LARPAYQSVR DLVQAGIDCG VVRTQHPALF FLLLSNSVHQ 
PHSVPVLLNE IAPDIAPAEA PSLLARSIVA TFLHSPTS