| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2480 |
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| Symbol | |
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| ID | 6410142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2675332 |
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| End bp | 2676249 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712359 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001991469 |
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| Protein GI | 192290864 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.145523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATCA GGTTCGACGG ACGCGTCGCC ATCGTCACCG GCGCGGGCAA CGGTCTCGGC
CGCGCGCATG CGCTGGGTCT CGCGGCGCTC GGCGCCAAGG TGGTGGTGAA CGATTTCGGC
GGCGCGCGTG ACGGCACCGG CGGTTCGATG ACCGCGGCCG AGACGGTGGT CGAAGAGATC
AAGAAGGCTG GCGGCACTGC GATGGCCGAC GGCGCCGACG TGTCGAACTA CGAGCAGGTC
CAGGCGATGG TCGCGAAGGC GACCAAGGAG TGGGGCAGCG TCGATCTGCT CGTCGCCAAC
GCCGGCATCC TGCGCGACAA GTCGTTCGGC AAGATGGAGC TGAGCGACTT CCAGAAGGTG
ATCGACGTGC ATCTCGCCGG CACCTTCTAC TGCTGCAAGG CGGTGTGGGA CGGCATGAAG
GAGCGCAACT ACGGCCGCAT CGTGCTGACC ACCTCGTCGT CGGGCATGTT CGGCAATTTC
GGCCAGGCCA ACTACGGCGC TGCGAAGGCC GGCATCGTCG GGCTGATGAA CGTGCTGGCG
CAGGAAGGCC GCAAGACCGA CATCCGCGTC AACACCGTGT CGCCGACCGC CGCGACCCGC
ATGACCGAAG AGCTGCTGCC GCCGCAGGCG CTGCAGCTGA TGAAGCCGGA GGCGATCACG
CCCGCGGTGC TGTTCCTGCT CAGCGAGAAC GCGCCGACCC GCACCACGCT CGGCGCCGGT
GCCGGCTCGT TCGCGCAGAT CAAGATCATC GAGACCGAAG GCATCAACCT GCCGGAGTCC
GAATGGACCC CCGACGCGAT CGCCGCGCAT TTCGCCGAGA TCAGCGACGA CTCCAAGGCC
CAGGCGCTCG AAGGCGCGTT CCAGCAGACG CAGAAGTACG TGGCGCAGGC CGCCGCGCGC
CTCGGCATCA AGATGTGA
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| Protein sequence | MAIRFDGRVA IVTGAGNGLG RAHALGLAAL GAKVVVNDFG GARDGTGGSM TAAETVVEEI
KKAGGTAMAD GADVSNYEQV QAMVAKATKE WGSVDLLVAN AGILRDKSFG KMELSDFQKV
IDVHLAGTFY CCKAVWDGMK ERNYGRIVLT TSSSGMFGNF GQANYGAAKA GIVGLMNVLA
QEGRKTDIRV NTVSPTAATR MTEELLPPQA LQLMKPEAIT PAVLFLLSEN APTRTTLGAG
AGSFAQIKII ETEGINLPES EWTPDAIAAH FAEISDDSKA QALEGAFQQT QKYVAQAAAR
LGIKM
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