Gene Rpal_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2477 
Symbol 
ID6410139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2673160 
End bp2673780 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID642712356 
ProductDSBA oxidoreductase 
Protein accessionYP_001991466 
Protein GI192290861 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.494112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGAAT TCTTCTTCGA CTGCTCGAGT CCGTGGACGT ATCTTGCCTT TCACAACATC 
CAGCCGCTGG CGAAGGAGAT GCGTGAGGAG ATCACCTGGC GGCCGATCCT GGTCGGCGGC
ATCTTCAACT CGGTCAATCC GAGCGTGTAC GAATCTCGCA AGACGCCGGT GCCGCTGAAG
GCACGCTACA TGCTGAAGGA TTTGTCGGAT TGGACACGCT CGGCGGGCCT TGCGATCAAG
ATGCCGCCCA GCGTGTTTCC GGTGAACAGC GTCAAGGCGA TGCGCGGCTG TCTCTGGCTG
TTGCGCGACA AGCCCGACGC GATGGTGCCG TTTGCGACCG CGGTGTTCGA AGCCTATTGG
GGCGACGATC AGGATATCTC CAAGGACGAC GTACTAAGCG CGATTTGCAC CAAATGTGGC
CTCGACCTGC AGGCATTCTT TGCCGCGATC GCGGAGCAGA GCATCAAGGA TCAGCTCAAG
GATAACACCG ACGAGGTGAT GGCGCGCGGC GGCTTCGGCT CGCCGACCAT CTTTGTGGAC
AAAACCGACA TGTATTTTGG TAACGATCGG CTGCCGTTGG TGCGCGAGGC GCTGGCGCGC
CGCAAGGCGG GTGCCGCCTG A
 
Protein sequence
MLEFFFDCSS PWTYLAFHNI QPLAKEMREE ITWRPILVGG IFNSVNPSVY ESRKTPVPLK 
ARYMLKDLSD WTRSAGLAIK MPPSVFPVNS VKAMRGCLWL LRDKPDAMVP FATAVFEAYW
GDDQDISKDD VLSAICTKCG LDLQAFFAAI AEQSIKDQLK DNTDEVMARG GFGSPTIFVD
KTDMYFGNDR LPLVREALAR RKAGAA