| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2468 |
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| Symbol | |
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| ID | 6410130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2663667 |
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| End bp | 2664413 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712347 |
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| Product | 20S proteasome A and B subunits |
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| Protein accession | YP_001991457 |
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| Protein GI | 192290852 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0887682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTATT GCTGTGGAGT TCTGGTGCGC GAGGGCCTGG TGATGGTCGC AGACACCCGC
ACCAATGCCG GGCTCGACAA CATCTCGACC TTCCGCAAGC TGCACGTTTT CAGCAAGCCT
GGCGACCGTA TCCTGGCGGT GGCGAGCGCC GGCAATCTGT CGATCAGCCA GTCGGTGCTG
TCGACCCTGA CCGAAGGTCT CGAAAATGCC GAGACCGGCG AGCGCGAAAC CCTGATCAGC
GCCTCCAGCA TGTTTCAAGC GGCGCAGCTG ATCGGCCGCG CGATCCGCCA CGTCAACGCC
ACCGAAGCCC AGGCGCTGAA AGCCGAAGAC ATCAACTACG AAGTGTCGTT CCTGTTCGGC
GGCCAGATCA GGGGCGAGCG GATGCGCCTG TTCATGATCT ACCCGGCCGG CAATTTCATC
GAATGCACCA TCGACACGCC CTACCTGCAG ATCGGCGAGC ACAAATACGG CAAGCCGGTA
CTGGACCGCG CCATCACCTT CGACGTCGAG CTTTACGAGG CGCTGAAGAC GAGCCTGATC
TCGATGGATT CGACGATGCG CTCCAACCTC GGCGTCGGCC TGCCGATCGA CGTGCTGGTG
GTGCGCACCG ACGTCTGCGA CGCCGACCTC AACCACCGCA TCGAGGCCGG CGAGCCCTAC
TTCCACGACC TCCGCTCGCG CTGGTCCGCC GCACTCCGGG CCGCCCACAA GAACATCCCG
CGCCCGCCCT ACAAGGATCA GGCGTGA
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| Protein sequence | MTYCCGVLVR EGLVMVADTR TNAGLDNIST FRKLHVFSKP GDRILAVASA GNLSISQSVL
STLTEGLENA ETGERETLIS ASSMFQAAQL IGRAIRHVNA TEAQALKAED INYEVSFLFG
GQIRGERMRL FMIYPAGNFI ECTIDTPYLQ IGEHKYGKPV LDRAITFDVE LYEALKTSLI
SMDSTMRSNL GVGLPIDVLV VRTDVCDADL NHRIEAGEPY FHDLRSRWSA ALRAAHKNIP
RPPYKDQA
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