Gene Rpal_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2462 
Symbol 
ID6410124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2659440 
End bp2660540 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content69% 
IMG OID642712341 
ProductRuBisCO-like protein 
Protein accessionYP_001991451 
Protein GI192290846 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.187649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGC GGATTATCGT CACCTATCAG GTCGCCGCGG CGCCGGCGGA GATCGCTGCG 
CGGGCCGAGG CGCTGGCGAT CGAGCAGAGC GTCGAATGTC CGCTGGCGGC GGTGACGGAG 
CAGCAGATCC GCGACGAGAT CGTCGGGCGG GTCGAGGCCA TTGCACCGAT CGGCGAGACG 
CGCTTTTCGG TGCGAGTCAG CCTAGCGAGC GCGACTGCGC CGGCCGAGCC GGGGCAGTTG 
CTCAACATGC TGTTCGGCAA CAGCTCGATC CAACCCGACG TCACGCTGGC CGATGTCGAA 
CTGCCGCCGG CCTATCCGGC CGCCTTCGGC GGGCCGAAGC TAGGCATCTC CGGTCTCCGC 
GCCAAGCTCG GCGCGCCGCG GCGGGCGCTA ACCGGGTCTG CACTGAAGCC GCAAGGGTTG 
GCGCCGGAGG CGCTGGCGGG CCTCGCGCAT CGGCTGGCGC TCGGTGGCGT CGATCTAATC 
AAGGACGACC ACGGCATCGC CGATCAGGCG TTCAGCCCGT TCGCGGCGCG CGTGCCGGCG 
GTGGCGCGCG CGATGCGTGA GGCCTGCGCC GTCCGCGGCG CCGCGATGCT GTACGCGCCG 
CACGTCTCCG GTTCGCTCGA CGACATGCGC CGGCAGCTCG ACATCGTCCG CCGCGAAGGC 
CTGTCGGTCG TGATGCTGAT GCCGATGATC GTTGGGCTGG CCAACTTCCA CCTGATCGCC 
AAGGAGGCGG AAGGGCTGAT CGTGCTGGCG CATCCGTCGC TGGCCGGTGC GCAGCGGATC 
GCGCCGGATC TGCTGCTCGG CAAACTGTTC AGGCTGCTGG GCGCCGACGC GACGATCTTC 
CCGCATTATG GCGGCCGGTT CGCCTATACG CCGGAAACCT GCCGCGCGCT GGCGGATGCC 
GCGCGGCGCG ATTGGCACGA TCTGAAGCCG TGCCTGCCGG TGCCGGCCGG AGGCATCGCG 
ATTGATCGCA TCAAAGAACT GCTGGCATTT TATGGGACCG ATGTGATGCT GCTGATCGGC 
GGCAGCCTGC TGGCGGCCGG CGAGCAACTG ACTGAGCACG CGGCGCGGTT CACCGCGGAG 
GTGGCAAGCC ATGGCCAATG A
 
Protein sequence
MSERIIVTYQ VAAAPAEIAA RAEALAIEQS VECPLAAVTE QQIRDEIVGR VEAIAPIGET 
RFSVRVSLAS ATAPAEPGQL LNMLFGNSSI QPDVTLADVE LPPAYPAAFG GPKLGISGLR 
AKLGAPRRAL TGSALKPQGL APEALAGLAH RLALGGVDLI KDDHGIADQA FSPFAARVPA 
VARAMREACA VRGAAMLYAP HVSGSLDDMR RQLDIVRREG LSVVMLMPMI VGLANFHLIA 
KEAEGLIVLA HPSLAGAQRI APDLLLGKLF RLLGADATIF PHYGGRFAYT PETCRALADA 
ARRDWHDLKP CLPVPAGGIA IDRIKELLAF YGTDVMLLIG GSLLAAGEQL TEHAARFTAE 
VASHGQ