| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2441 |
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| Symbol | |
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| ID | 6410103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2634329 |
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| End bp | 2635234 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712320 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001991430 |
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| Protein GI | 192290825 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTCAAT TCGACGAGAC CGACCTCACC GAGGCGGTCG TCAAGAGCTT CGACGAAACA
CCCGATCCGC GCATGAAGCT GTTGATGCGC GAGCTGGTGC GCTCGCTGCA CGACTACGTC
CGCCGCACCG GCCTGACCTT CGAGGAATGG GAGAAGGCGA TCGATTTTCT CACCCGCACG
GGGCAGAAAT GCACGCCGAG CCGGCAGGAA TTCATCCTGC TGTCGGACGT GCTCGGGGTC
TCGATGTTGG TCGATGCCGT CAATCACCGC GACCGCGCCG GCGCGACGCA GACGACGGTG
CTCGGCCCAT TCTACGTCGG CGAGCACAAG CCGACGCCGC AAGGCGCCGA CATCTCCGAA
GGCGTCGATG GTGAGCCGAT GTATGTCACG GCCCACGTCA CCGATCTCGA CGGCGCGCCG
ATCGTGAACG CGGCGGTCGA TGTCTGGCAC GCCGACGACG ACGGCTTCTA CGATTCTCAG
AAACCCGGCT ATGCCGAGCA GGGCCCGTCG CTGCGAGCGC GGTTCGCGAC CGACGCGGAC
GGCCGGGTGG CGTTCCGCAC CATCCTGCCG TGCAGCTACC CGATCCCGAT CGACGGTCCG
GTCGGTGACC TGATCCTGGC GGCCCGCCGG CACCCGATGC GGCCGGCGCA CGTCCATTTT
CTGGTCAGCG CCCCTGGCTT CGAGCCGCTG GTCACCCATG TCTTCATCGA AGGTGATAAA
TATCTCGAGT CCGACGTCGT CTTCGGGGTC AAGGACGAGC TGATTTCGAA CGTTGAATTG
CGCAACGATG CGGTGATGCC CGACGGGCGC GAAGCCTCGG GACCGTGGCA TTTGATGACC
TACGAGTTCC GGCTGAAGCC GGGCCAAGGC GCCGCGCCGC GGCCGATGAT GGCCAGTACG
GCGTGA
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| Protein sequence | MPQFDETDLT EAVVKSFDET PDPRMKLLMR ELVRSLHDYV RRTGLTFEEW EKAIDFLTRT
GQKCTPSRQE FILLSDVLGV SMLVDAVNHR DRAGATQTTV LGPFYVGEHK PTPQGADISE
GVDGEPMYVT AHVTDLDGAP IVNAAVDVWH ADDDGFYDSQ KPGYAEQGPS LRARFATDAD
GRVAFRTILP CSYPIPIDGP VGDLILAARR HPMRPAHVHF LVSAPGFEPL VTHVFIEGDK
YLESDVVFGV KDELISNVEL RNDAVMPDGR EASGPWHLMT YEFRLKPGQG AAPRPMMAST
A
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