| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2438 |
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| Symbol | |
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| ID | 6410100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2629656 |
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| End bp | 2631194 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712317 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001991427 |
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| Protein GI | 192290822 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCAT CCGAGATGAT CCGGCGCGGC GCTGTGTATC ACGGGCCGAA GACGGCGGTG
ATGTTCGGCG ATCAGCGCAT GACCTTCACC GAAGTCGATC TGCTGTCGAA TCGGATCGCC
AATGTCTTCA TCGACACCTT CAGGCTCGAG GTCGGCAGCC GGGTCGGCAT GCTGCTGAAC
AATTCGATCT ACACGCTGCC GATCGATTTC GGCTTCGTCA AATCGAGGCT GTCGCGGGTG
CCGCTGAACT CGCGGCTATC GCTGGTCGAA CAGCAGCAGA TGCTGGAAGG TGCCGGCGTC
AACATCCTGA TCCACGGCAC CGACCTGACC GACCGCGCCC GAGAGCTGGC GCAGGCGATG
CAGGGGCTCA AGCTGATCAG CATCGGCAGC GCGGACGCGG ACGATCTGCT GCAGCTCGCC
AAGGCCCAAT CCGATGCGCC GCCGGCGCGG CGCTGCGAGC CGGACGACAT CGTCATCACC
ATCTTCACCT CGGGCACCAC CGGCAAGCTC AAGGCGGTGG AGCACACCCA GGCGAGCTGG
GCGGCGATGG CCACCAACGT GCTGATCAAC ATGGAGGTCG GCGAGGGCGA CGTGATGCTG
CACGCTGCCT CGATGATCCA CGCCTCGGGC TGTTTCATCG TGCCGTATTG GCTGCGCGGC
GGCGTTGCCG CGGTGCTGCC GGGCTTCACG CCGGCGAGCT ACCTCGACGC GGTCGAGCGC
TGGAAGCCGA CCGCGCTCAA TCTGGTGCCG ACCATGATCG GCATGCTGCT CGATCATCCG
GGCATCGAGC AGGCCGACTT TTCGAGCGTC AAGCGCATCA TCTATGGTGC CTCGCCGATG
CCGCGGCCGG TGATGCAGCG GGCGTTGAAA CTGTGGGGCC CGCGGTTCGC GCAGTATTAC
GGGCAGTCGG AGGCGCCGAT CTTCATCACC CATCTGACCC AGGCCGATCA CGTCGGACCG
AAGGCTGAGC AGCGGCTTGC CTCGTGCGGC CGGCCGTCGA TCGATTGCGA GGTCAAGCTG
GTCGATGAAG CCGGCGATGA GGTCGCGTCG GGCGAGGCCG GCGAGATCGC GCTGCGTACG
CCGTTCGCGA TGAAGGGCTA CTACAACGCG CCGGAATTGA ATGCGCAGAT GTTTCTGCCG
GATGGCTGGC TGCGCACCCG CGACGTCGGC CGCTTCGACG CGGACGGCTA TCTGTACCTG
GTCGACCGCA CCTCCGACAT GATCGTCTCG GGCGGCTACA ACGTCTATCC GCGCGAGGTC
GAGGACGCGC TTGCGGCGCA TCCGGCGGTG CGCGAGGTGG TGGTGGTCGG GTTGCCCGAC
GACAAATGGG GCGAGAGTGT CGCGGCCTTC GTGGCGCTGC GCGCGGGCGC GAGTGCCGAG
GAGGCCGAAC TGATCGCTTT CGCGCGCGAG CGGGTGGCGA GCTACAAGGT GCCGAAGCAG
GTGCGGTTCA TCGACGAGGT GCCGAAGAGC CCGGTCGGCA AGCTGCTGCG CCGCGCGGTG
CGCGATCCGT TCTGGCAGGG CCGCGAGCGC AAGATCTGA
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| Protein sequence | MLASEMIRRG AVYHGPKTAV MFGDQRMTFT EVDLLSNRIA NVFIDTFRLE VGSRVGMLLN
NSIYTLPIDF GFVKSRLSRV PLNSRLSLVE QQQMLEGAGV NILIHGTDLT DRARELAQAM
QGLKLISIGS ADADDLLQLA KAQSDAPPAR RCEPDDIVIT IFTSGTTGKL KAVEHTQASW
AAMATNVLIN MEVGEGDVML HAASMIHASG CFIVPYWLRG GVAAVLPGFT PASYLDAVER
WKPTALNLVP TMIGMLLDHP GIEQADFSSV KRIIYGASPM PRPVMQRALK LWGPRFAQYY
GQSEAPIFIT HLTQADHVGP KAEQRLASCG RPSIDCEVKL VDEAGDEVAS GEAGEIALRT
PFAMKGYYNA PELNAQMFLP DGWLRTRDVG RFDADGYLYL VDRTSDMIVS GGYNVYPREV
EDALAAHPAV REVVVVGLPD DKWGESVAAF VALRAGASAE EAELIAFARE RVASYKVPKQ
VRFIDEVPKS PVGKLLRRAV RDPFWQGRER KI
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