| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2433 |
|---|
| Symbol | |
|---|
| ID | 6410095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2622099 |
|---|
| End bp | 2622965 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642712312 |
|---|
| Product | protein of unknown function DUF849 |
|---|
| Protein accession | YP_001991422 |
|---|
| Protein GI | 192290817 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.621759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA AGGCGGTGAT CACCTGCTCG CTGAACGGCG TGCTGACCGA TCCGAAGCAG
CACCACGTCC CGGTGACGCC GGAACAGATG GCCCGCGAGG CCAAGGCGGC CTACGATGCC
GGCGCCGCCA TCGTTCATAT CCATCTGCGC GATCAGCGCC CGGACAAGGG CCATCTGCCG
AGCTGGGACG TCGACGTGTC GCGCGAGATC CAGCAGGCGA TCCGCGACGC CTGCCCGGGC
ATCATCATCA ATCACACCTC CGGCACCTCG GGGCCGAACT ATCAGGGCCC GCTGGCCTGC
ATCCGCGAAA CCAGGCCGGA AATCGCCGCC TGCAACGCCG GCTCGCTGAA CTATCTCAAA
GTGAAGTCCG ACAATAGCTG GGCCTGGCCG CCGATGATGT TCGACAATTC GGTCGAAAAG
ATCGCGGACT TCCTCGGCGC GATGAAGGAC GCCGGGACCA TCCCCGAATT CGAGTGCTTC
GACGTCGGCA TCGTCCGCTG CGTCGGCATG TATGTGCAGA CCGGGATGTA TTCCGGCCCG
CTCGAATACA ACTTCGTGAT GGGCGTCGCC TCCGGCATGC CGGCCGATCC CGAACTGCTG
CCGATCCTGC TCAAGCTGAT GCGACCCGAA GCGCATTGGC AGGTCACCGC GATCGGCCGC
GCCGAAATCT GGCCGCTGCA TCAGGCCTGC GCCGATCTCG GCGGCCATCT GCGCACCGGG
CTCGAAGACA CGTTCTATCT CGCCAACGGC GAGAAAGTGA CCTCGAACGG CCAATTGATC
GAAGAGATCG CCGGCTGTGC CCGCCGGGCT GGGCGTGAGA TCGCCTCGCC GGAAGAAGCA
CGCAAGATCT TCGGCGTGCT GCATTAG
|
|---|
| Protein sequence | MSDKAVITCS LNGVLTDPKQ HHVPVTPEQM AREAKAAYDA GAAIVHIHLR DQRPDKGHLP
SWDVDVSREI QQAIRDACPG IIINHTSGTS GPNYQGPLAC IRETRPEIAA CNAGSLNYLK
VKSDNSWAWP PMMFDNSVEK IADFLGAMKD AGTIPEFECF DVGIVRCVGM YVQTGMYSGP
LEYNFVMGVA SGMPADPELL PILLKLMRPE AHWQVTAIGR AEIWPLHQAC ADLGGHLRTG
LEDTFYLANG EKVTSNGQLI EEIAGCARRA GREIASPEEA RKIFGVLH
|
|---|
| |