| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2427 |
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| Symbol | |
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| ID | 6410089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2614905 |
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| End bp | 2617028 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712306 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001991416 |
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| Protein GI | 192290811 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.215124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACCG CCCAACGTGA TTCGCTGCGG TTGCTCCGCG CAATCCTGGT CGCATCCGTG
GTGCTGCCGA TCGCGCTGTT CAGCTATGCC TCGTGGCTGG CGTATCGCAC CAACGAAGCC
AACGCCGATC GCCAGATCGA CAAGACCCGC GACATCATCA CCGAGCACGC ACTGAAGATC
TTCGAGTCGG TGCAGCGCTC GATCGCGGAG ACCGCCGAAA TCGTGCGCGG CATGTCGGAC
GACGAGATCC GTGCGAACGA ACCGGCCCTG CATGAGCGAC TGAAGCGGCT GGTCGGCGGG
TCCGAGCAGA TCAAGTCGAT GTGGATCTTC GACAAGACCG GGCGACCGCT GGTCAACACG
ATGCAGTTCC CGTCGCCGAC GCCCGACCTG TCCGATCGCG ATTATTTCCG GATCCATCTC
GGCAAGAACA CCGGGCTCTA TGTCGGCCGG GTGCTGCAGC CGCGTCCGCC ATTCGATGGC
GCTCCGTTCT TCAGTGTGAG CCGACGTCGC GATGCGTCGG ACGGCAGTTT CGCCGGGGTG
ATCCAGACAT CCGTCCTGCC GGACTACTTC GAGGGCTTCT ACGCCAAGGT CGGCCGTGAG
GATGGCAGCT TCGCTTCGCT GGTCCGCGAG GACGGCGCGA TCCTCGCCCG GATGCCGGAA
ATCGACGGCA CCGACACCGC CGTGAAGCCG GACGGCATCG TCGGCCAGGC GATCCGCGAA
GGCCACAGCG AGGGGCGGAT GACCACGGTG TCGTCGCTCG ACGGCGTCGA ACGCCGCGTC
GCATTTCGCA AGCTGCCCAG TCTGCCGGTC TATGTGTTCG CCGGCCTGGA GACGAGCGCG
ATCCGCGCGA CGTGGCTGGC GCAGATGGGC GCCTATCTGC TGGTCGGCCT GCCCGCCACT
GCCGCGCTGA TCGCGATCGT GCTGCTGGCG ATACGGCGGA CACAAAAGCT CTATGAAGAA
GCCGACCGCC GCCACATCGC CGAGAATGCG CTGAAGCAGT CGCAGCGGCT GGAGTCGCTC
GGCCGCCTCA CCGGCGGCGT CGCGCATGAC TTCAACAACC TGCTGATGGT CGTCGGCGGC
TCGGTGCAGA GGCTGCGGCG CCGGCACAGC AACCTGCAGG ACATCCGCAG CTTCGACATG
ATCGACTCCG CCGTCGCAAA GGGTACGGCG CTGACCCGGC AATTGCTATC GTTCTCGCGC
CGGCACAACG TCGCGGCCAA AGCGGTCGAC CTCGGCGACG CCGTGACGAA GTTCGCCGAC
GTGCTGAGGC AATCGGTGCG CAGCGACATC GGCATCATGA TCGACCCGCC GGCCGAGCCG
GTGGTGGTGA TGATCGATCC CAACGAGTTC GAGATCGCGC TGCTCAACCT TGCGCTCAAC
GCACGCGACG CGATGCCCGA CGGCGGCCGG ATCACCATCT CGATCCGCAC CGAAACGCTG
AAGAACTTCG GCCCCCGCAA GCTCACCGGC ACCTACGCCA TTCTGTCGTT TGCCGACACT
GGTGTCGGCA TCCCGGACGA CATTCGCGAG CGGATTTTCG AGCCGTTCTT CACCACCAAG
CCGGTCGACC GCGGCACTGG TCTCGGCCTC AGCCAGATCT ACGGCTTCGT GCAGCAATCG
AGCGGCGCGA TTACCGTCGA CAGCGACCTA GGCCGGGGCA CGCGGTTTGA TTTGTTCCTG
CCGCTCTCGG CCGAAGCGCT CGGCCTAGAC GAGCCCACGG CGGAGCTGGC CCCGCCGCAA
TCCGGAAAGC CAAAGACGCT GTTGCTGGTG GAAGATCATC CCGATGTCGC CTCGGTCGCG
GCCGACTATG CGGGGCAATG CGGCTTCACC GTGGTGCCGG CGAACTGCGC CGAGGCAGCG
GTCGAAGTGC TCAATCGCCG GAGAGACATC GATCTGGTGT TCAGCGACAT CGTCATGCCC
GGCATGAGCG GGCTCGAACT GGCTCGCCTG ATCCGCGAGC ATCATCCGGA AACCCCGGTG
GTACTCGCCT CAGGCTACAG CGACCGCTCG GCGTCAGCGC TCAGCGAGGG CTTTGCATTG
CTGCAGAAGC CCTACACCCT CGACGAGATG CGGGCGGCGC TGACCCAAGC GCTGCAAGGC
GCCTCCGACA CAGCGCCGGT CTAA
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| Protein sequence | MLTAQRDSLR LLRAILVASV VLPIALFSYA SWLAYRTNEA NADRQIDKTR DIITEHALKI
FESVQRSIAE TAEIVRGMSD DEIRANEPAL HERLKRLVGG SEQIKSMWIF DKTGRPLVNT
MQFPSPTPDL SDRDYFRIHL GKNTGLYVGR VLQPRPPFDG APFFSVSRRR DASDGSFAGV
IQTSVLPDYF EGFYAKVGRE DGSFASLVRE DGAILARMPE IDGTDTAVKP DGIVGQAIRE
GHSEGRMTTV SSLDGVERRV AFRKLPSLPV YVFAGLETSA IRATWLAQMG AYLLVGLPAT
AALIAIVLLA IRRTQKLYEE ADRRHIAENA LKQSQRLESL GRLTGGVAHD FNNLLMVVGG
SVQRLRRRHS NLQDIRSFDM IDSAVAKGTA LTRQLLSFSR RHNVAAKAVD LGDAVTKFAD
VLRQSVRSDI GIMIDPPAEP VVVMIDPNEF EIALLNLALN ARDAMPDGGR ITISIRTETL
KNFGPRKLTG TYAILSFADT GVGIPDDIRE RIFEPFFTTK PVDRGTGLGL SQIYGFVQQS
SGAITVDSDL GRGTRFDLFL PLSAEALGLD EPTAELAPPQ SGKPKTLLLV EDHPDVASVA
ADYAGQCGFT VVPANCAEAA VEVLNRRRDI DLVFSDIVMP GMSGLELARL IREHHPETPV
VLASGYSDRS ASALSEGFAL LQKPYTLDEM RAALTQALQG ASDTAPV
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