Gene Rpal_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2418 
Symbol 
ID6410080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2606418 
End bp2607215 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID642712297 
ProducttonB-system energizer ExbB 
Protein accessionYP_001991407 
Protein GI192290802 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTAAAC CCCAAGGCGC CGCGGCAGGG CGGGCGGGCG CAGCGATCGC GGCGGTCGCC 
TTCATTGCCG CGGCGCTGCC GGGGGATGCG TGGGCGGCGG CCGATCTCGC GACGCTGCCG
CGCGACCTGT CGCCCTGGGG GATGTTCCTC GGCGCCGACG CGGTAGTGAG GACCGTGATG
GTTGGGCTGG CGCTGGCTTC GCTCGCGGCG TGGACGGTGT GGCTGGCGAA GTCGATCGAA
CTGCGCCGCA GTAGTGCGGT GGCACAGCGT GGTCTCGACC GGCTAGAGAG CGACATCACG
CTGCAGCAGG CTGCGGCTGA GACCGCCGAT CAGCACGATG CGGTGGCGCA GATGATCCAG
ACCGTTGATC GCGAGGCCAG CCTGTCCGGC GGCGCCCATG ACGACGGCTT CCGTGAGCGG
GTGGCGCTGC GGCTGGAGCG GGTCGAGGCT GCGGAAGCGC GCCGCGCCGC GATCGGCACG
GGTCTGCTCG CGAGCATTGG CGCGGTGGCG CCGTTCGTCG GCCTGTTCGG CACGGTGTGG
GGGATCATGA ACGCGTTCAT CGGCATTTCG AAAGCCAACA CCACCAATCT TGCGGTGGTG
GCGCCGGGCA TCGCCGAGGC GCTGCTCGCC ACGGCGCTCG GGCTCGTCGC CGCGATCCCG
GCGGTCGTGA TCTACAATCA TCTGACCCGG CGAGTGACGG CGTATCGAGC GCTACTCGGC
GACGCGTCGA CCCAATTGCT GCTGATGATC AGTCGCGAGG CGGCGCGGCC GGCGCAGCGT
GCCCGCATGG TGAGGTAA
 
Protein sequence
MRKPQGAAAG RAGAAIAAVA FIAAALPGDA WAAADLATLP RDLSPWGMFL GADAVVRTVM 
VGLALASLAA WTVWLAKSIE LRRSSAVAQR GLDRLESDIT LQQAAAETAD QHDAVAQMIQ
TVDREASLSG GAHDDGFRER VALRLERVEA AEARRAAIGT GLLASIGAVA PFVGLFGTVW
GIMNAFIGIS KANTTNLAVV APGIAEALLA TALGLVAAIP AVVIYNHLTR RVTAYRALLG
DASTQLLLMI SREAARPAQR ARMVR