Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2418 |
Symbol | |
ID | 6410080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2606418 |
End bp | 2607215 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642712297 |
Product | tonB-system energizer ExbB |
Protein accession | YP_001991407 |
Protein GI | 192290802 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGTAAAC CCCAAGGCGC CGCGGCAGGG CGGGCGGGCG CAGCGATCGC GGCGGTCGCC TTCATTGCCG CGGCGCTGCC GGGGGATGCG TGGGCGGCGG CCGATCTCGC GACGCTGCCG CGCGACCTGT CGCCCTGGGG GATGTTCCTC GGCGCCGACG CGGTAGTGAG GACCGTGATG GTTGGGCTGG CGCTGGCTTC GCTCGCGGCG TGGACGGTGT GGCTGGCGAA GTCGATCGAA CTGCGCCGCA GTAGTGCGGT GGCACAGCGT GGTCTCGACC GGCTAGAGAG CGACATCACG CTGCAGCAGG CTGCGGCTGA GACCGCCGAT CAGCACGATG CGGTGGCGCA GATGATCCAG ACCGTTGATC GCGAGGCCAG CCTGTCCGGC GGCGCCCATG ACGACGGCTT CCGTGAGCGG GTGGCGCTGC GGCTGGAGCG GGTCGAGGCT GCGGAAGCGC GCCGCGCCGC GATCGGCACG GGTCTGCTCG CGAGCATTGG CGCGGTGGCG CCGTTCGTCG GCCTGTTCGG CACGGTGTGG GGGATCATGA ACGCGTTCAT CGGCATTTCG AAAGCCAACA CCACCAATCT TGCGGTGGTG GCGCCGGGCA TCGCCGAGGC GCTGCTCGCC ACGGCGCTCG GGCTCGTCGC CGCGATCCCG GCGGTCGTGA TCTACAATCA TCTGACCCGG CGAGTGACGG CGTATCGAGC GCTACTCGGC GACGCGTCGA CCCAATTGCT GCTGATGATC AGTCGCGAGG CGGCGCGGCC GGCGCAGCGT GCCCGCATGG TGAGGTAA
|
Protein sequence | MRKPQGAAAG RAGAAIAAVA FIAAALPGDA WAAADLATLP RDLSPWGMFL GADAVVRTVM VGLALASLAA WTVWLAKSIE LRRSSAVAQR GLDRLESDIT LQQAAAETAD QHDAVAQMIQ TVDREASLSG GAHDDGFRER VALRLERVEA AEARRAAIGT GLLASIGAVA PFVGLFGTVW GIMNAFIGIS KANTTNLAVV APGIAEALLA TALGLVAAIP AVVIYNHLTR RVTAYRALLG DASTQLLLMI SREAARPAQR ARMVR
|
| |